AMCG00013006


Basic Information

Item Value
gene id AMCG00013006
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16155679 ~ 16183420 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013006
ATGCCCACCCAACGACGCAGCAATGTGAAATTCGTGGACAGCAACGGtattgagaaaaaaattaaaagGGGCACTGCTCAGAGGCAGGCTGTGTGGTGGTGGAGACCCCAGGCTGGCCTACTCCTCCTGTCTCTGTTGTCTTGTGTGGGGGGCTTGGCCTGGTTATACCTGACCCCAGATGATGGCATCACCGAGACCCTTGTTAGGCAGGGGGAGACGGTGCCGGAGCAGAGAGTGTACCAGGTGTCCTGCTCGGAAGATTACGACAACTACAAACGCTACCCTGGTTGTACCCCTCAGAAGTGTGGCAGGGCCGTCACAGACTCGGTGGTGAGCAGAGAGGAGGCAGCCATTTTGAGGAGGTATTTTGGAGAGCAGATCAAAGATGTCTTTTCTAAGGAGGATTTTGAGCTCTACCGGAGCAGGTGTTACTCCTGCACACTTAAAAAGTCTTTCTTGCCTCCTAGATCAGTAAGACAGAGGATACAAGAGACGATAGCCCAGACGTTCGGCCTAGATTCTTCCCGGCTCTACCTTACCAACCCCACGTTCTTCTCACGAATCAATAGCACCCTGGCTAAAACCACCCACGATGAGTACTGGCACCCCCACATCGACAAGGTGACCTACGGCTCCTTTGACTACACATCTCTGCTCTACCTCTCAGACTATGGGGTAGATTTCGGGGGCGGTCGCTTTATCTTCATGGACACGTCAGCCAATAGGACTGTGGAGCCCAGAGCAGGTGAGCGGTCAAATGTCACGCCTGTTGCGTTCCATGTGTCTGTTGTGGTTCACCAAGTTAGGGACTTTCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013006 True 819 mRNA 0.53 6 16155679 16183420

Neighbor

gene id symbol gene type direction distance location
AMCG00013005 NA coding upstream 10254 16137999 ~ 16145425 (+)
AMCG00013000 NA coding upstream 126853 16022722 ~ 16028826 (+)
AMCG00012996 LOC107567801,LOC107578800,LOC107549326 coding upstream 141369 16008943 ~ 16014310 (+)
AMCG00012992 NA coding upstream 184441 15957831 ~ 15971238 (+)
AMCG00012993 NA coding upstream 198679 15956821 ~ 15957000 (+)
AMCG00013009 NA coding downstream 252644 16436064 ~ 16437861 (+)
AMCG00013017 NA coding downstream 459496 16642916 ~ 16677331 (+)
AMCG00013010 NA coding downstream 524852 16708272 ~ 16710011 (+)
AMCG00013016 NA coding downstream 563750 16747170 ~ 16757092 (+)
AMCG00013023 kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 coding downstream 1286186 17469606 ~ 17476756 (+)
G41484 NA non-coding upstream 30808 16121443 ~ 16124871 (+)
G41469 NA non-coding upstream 81580 16073514 ~ 16074099 (+)
G41325 NA non-coding upstream 296309 15859064 ~ 15859370 (+)
G41303 NA non-coding upstream 432813 15719507 ~ 15722866 (+)
G41282 si:dkey-180p18.9,akr1b1,LOC107729832,LOC107690495,LOC107587162,LOC107725652 non-coding upstream 596374 15556146 ~ 15559305 (+)
G41517 NA non-coding downstream 149870 16333290 ~ 16333574 (+)
G41536 NA non-coding downstream 399982 16583402 ~ 16583699 (+)
G41537 NA non-coding downstream 440000 16623420 ~ 16623650 (+)
G41564 NA non-coding downstream 546647 16730067 ~ 16731293 (+)
G41565 NA non-coding downstream 549484 16732904 ~ 16733177 (+)
G41264 hbp1,LOC108230206,LOC107701066 other upstream 337337 15477179 ~ 15818342 (+)
AMCG00012987 NA other upstream 364052 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 524676 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 582211 15570906 ~ 15573468 (+)
AMCG00012973 NA other upstream 585736 15566493 ~ 15569943 (+)
AMCG00013015 NA other downstream 535935 16719355 ~ 16729533 (+)
AMCG00013047 NA other downstream 1975422 18158842 ~ 18230238 (+)
AMCG00013068 NA other downstream 2784009 18967429 ~ 18974362 (+)
G41978 NA other downstream 2842141 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 5086255 21269675 ~ 21278728 (+)

Expression


Co-expression Network