AMCG00013009


Basic Information

Item Value
gene id AMCG00013009
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16436064 ~ 16437861 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013009
ATGGCCTTGGGTTGTCTGGCGTTCGGGGCCCTCATCGCAGCTCTACAACAGCGATTCGGAGCCGGGGAACAAGCTAGCACCTGGATTGAGATGTTGACCACATTGATGAGGAAGCCGGGAGAGAAGCTAGGTCCTTTAGCCGCAGACGCACTATACAAGGTCCAGTGGAGCTATCCGGGGTTCCCACCTTCAGTCCAAGCGGAACTCGCTCTCCAGGCCTTCCTCCAGGTACTATTTCCAGAAGAGTTCCACTGCTACGTGGGACTGGTAGCACCCACCACACTCGAGCAAGCCTTACAGCTGGTGACCCATGCAGAAGGAGTGTTTGGCTCCACCAGACCACAATCCAAGCGAGCCCTTCCGTGTTTCCACACAGAGGTGACAGATGACGAGGAGATGGCTTGCGTTGCAGAGTCAGCCAACAAGTTATGGGACTTTATCTGCCAATGATGTCAGCCAGTGTATATCACTTTCTCACTGGATTCCAGAGCCAAGGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013009 True 501 mRNA 0.54 2 16436064 16437861

Neighbor

gene id symbol gene type direction distance location
AMCG00013006 NA coding upstream 252644 16155679 ~ 16183420 (+)
AMCG00013005 NA coding upstream 290639 16137999 ~ 16145425 (+)
AMCG00013000 NA coding upstream 407238 16022722 ~ 16028826 (+)
AMCG00012996 LOC107567801,LOC107578800,LOC107549326 coding upstream 421754 16008943 ~ 16014310 (+)
AMCG00012992 NA coding upstream 464826 15957831 ~ 15971238 (+)
AMCG00013017 NA coding downstream 205055 16642916 ~ 16677331 (+)
AMCG00013010 NA coding downstream 270411 16708272 ~ 16710011 (+)
AMCG00013016 NA coding downstream 309309 16747170 ~ 16757092 (+)
AMCG00013023 kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 coding downstream 1031745 17469606 ~ 17476756 (+)
AMCG00013032 NA coding downstream 1071426 17509287 ~ 17517737 (+)
G41517 NA non-coding upstream 102490 16333290 ~ 16333574 (+)
G41484 NA non-coding upstream 311193 16121443 ~ 16124871 (+)
G41469 NA non-coding upstream 361965 16073514 ~ 16074099 (+)
G41325 NA non-coding upstream 576694 15859064 ~ 15859370 (+)
G41303 NA non-coding upstream 713198 15719507 ~ 15722866 (+)
G41536 NA non-coding downstream 145541 16583402 ~ 16583699 (+)
G41537 NA non-coding downstream 185559 16623420 ~ 16623650 (+)
G41564 NA non-coding downstream 292206 16730067 ~ 16731293 (+)
G41565 NA non-coding downstream 295043 16732904 ~ 16733177 (+)
G41566 NA non-coding downstream 297501 16735362 ~ 16735848 (+)
G41264 hbp1,LOC108230206,LOC107701066 other upstream 617722 15477179 ~ 15818342 (+)
AMCG00012987 NA other upstream 644437 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 805061 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 862596 15570906 ~ 15573468 (+)
AMCG00012973 NA other upstream 866121 15566493 ~ 15569943 (+)
AMCG00013015 NA other downstream 281494 16719355 ~ 16729533 (+)
AMCG00013047 NA other downstream 1720981 18158842 ~ 18230238 (+)
AMCG00013068 NA other downstream 2529568 18967429 ~ 18974362 (+)
G41978 NA other downstream 2587700 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 4831814 21269675 ~ 21278728 (+)

Expression


Co-expression Network