Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013010 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 16708272 ~ 16710011 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006631 | fatty acid metabolic process | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0016874 | ligase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013010 | True | 438 | mRNA | 0.49 | 3 | 16708272 | 16710011 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013017 | NA | coding | upstream | 30941 | 16642916 ~ 16677331 (+) |
| AMCG00013009 | NA | coding | upstream | 270411 | 16436064 ~ 16437861 (+) |
| AMCG00013006 | NA | coding | upstream | 524852 | 16155679 ~ 16183420 (+) |
| AMCG00013005 | NA | coding | upstream | 562847 | 16137999 ~ 16145425 (+) |
| AMCG00013000 | NA | coding | upstream | 679446 | 16022722 ~ 16028826 (+) |
| AMCG00013016 | NA | coding | downstream | 37159 | 16747170 ~ 16757092 (+) |
| AMCG00013023 | kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 | coding | downstream | 759595 | 17469606 ~ 17476756 (+) |
| AMCG00013032 | NA | coding | downstream | 799276 | 17509287 ~ 17517737 (+) |
| AMCG00013029 | NA | coding | downstream | 823834 | 17533845 ~ 17557349 (+) |
| AMCG00013031 | NA | coding | downstream | 852719 | 17562730 ~ 17563944 (+) |
| G41537 | NA | non-coding | upstream | 84622 | 16623420 ~ 16623650 (+) |
| G41536 | NA | non-coding | upstream | 124573 | 16583402 ~ 16583699 (+) |
| G41517 | NA | non-coding | upstream | 374698 | 16333290 ~ 16333574 (+) |
| G41484 | NA | non-coding | upstream | 583401 | 16121443 ~ 16124871 (+) |
| G41469 | NA | non-coding | upstream | 634173 | 16073514 ~ 16074099 (+) |
| G41564 | NA | non-coding | downstream | 20056 | 16730067 ~ 16731293 (+) |
| G41565 | NA | non-coding | downstream | 22893 | 16732904 ~ 16733177 (+) |
| G41566 | NA | non-coding | downstream | 25351 | 16735362 ~ 16735848 (+) |
| G41577 | NA | non-coding | downstream | 63338 | 16773349 ~ 16776045 (+) |
| G41611 | NA | non-coding | downstream | 436704 | 17146715 ~ 17146976 (+) |
| G41264 | hbp1,LOC108230206,LOC107701066 | other | upstream | 889930 | 15477179 ~ 15818342 (+) |
| AMCG00012987 | NA | other | upstream | 916645 | 15782364 ~ 15791627 (+) |
| AMCG00012982 | ssbp1,LOC106576077,LOC106609216 | other | upstream | 1077269 | 15620735 ~ 15631003 (+) |
| AMCG00012978 | NA | other | upstream | 1134804 | 15570906 ~ 15573468 (+) |
| AMCG00012973 | NA | other | upstream | 1138329 | 15566493 ~ 15569943 (+) |
| AMCG00013015 | NA | other | downstream | 9344 | 16719355 ~ 16729533 (+) |
| AMCG00013047 | NA | other | downstream | 1448831 | 18158842 ~ 18230238 (+) |
| AMCG00013068 | NA | other | downstream | 2257418 | 18967429 ~ 18974362 (+) |
| G41978 | NA | other | downstream | 2315550 | 19025561 ~ 19029278 (+) |
| G42326 | LOC105030495,LOC106938339,LOC103143718,LOC103461378 | other | downstream | 4559664 | 21269675 ~ 21278728 (+) |
