AMCG00013011


Basic Information

Item Value
gene id AMCG00013011
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16716516 ~ 16718657 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013011
ttcagctgatTGAGATGATCAATGCTGGAAGACCTCGACAGGATACACAACACTGAACCGATCATTGATCCCAGAAGTGTGATGTTCTCTAGGAGAGGAGGTTCCCAAGGCCTGGACCGGTTTGAATATCTGCAGACACTGGTCACGGAATTTCAGGACACCGACAGCCTAGATGCAAAGGAACAAGTGCTGGCAAACCTGGCAAATTTTTCTTATGATCCCAGTAACTATGAGGACCTCAGAAAACTTCATGTTATTGACCTCTTTTTAGACATGCtgacagaggacagagagagtgttGTAGAATTTGGGATAGgAGGTCTGTGCAACCTGAGCCTGGATAAAATCAACAAAGAATACATCCTGCAGAACAATGGTGTGAAGCTGGTTATTGGCTGTTTGTCAAGTCCCTCTGAGGAGACCGTGCTCTCTGCCATCACTACTCTAATGTACCTCATGACCCCTGCCTCCCGCCAGGAGATCACCCATACTGCAGTGGTGGAGTGTATGCTGCGTTTTTCCCTCTCTGCCAACAGGCGACTAAGCAATCTGGCATCAGTCTTCCTGCAGGACTATTGTTCTGTGGAGCAGGTGGAGAAAGCCCAGAGTTTACAGGGACAAAGTGCACTGGGCATCCCACTACCCAAGGATTAGACCATGGATCTGGGCAGGACAGTTGTTTCTGTGATTCTGTCTTACTAATAATCAGATATTTCTGTTATACCACTAGCTgccttttcacattttccaatttTAATAAACTAATGTACACTGAATA

Function

GO: NA

KEGG:

id description
K24825 ARMC7; armadillo repeat-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013011 True 778 mRNA 0.46 3 16716516 16718657

Neighbor

gene id symbol gene type direction distance location
AMCG00013012 NA coding downstream 29212 16678160 ~ 16687304 (-)
AMCG00013008 LOC101481179,LOC102780800,LOC107388280,LOC103369862,LOC107743796,LOC107577513,LOC107691210 coding downstream 182669 16532750 ~ 16533847 (-)
AMCG00013007 LOC108274136,LOC107754112,LOC107743783,LOC107691214,LOC107566616,LOC107568947 coding downstream 465306 16250137 ~ 16251210 (-)
AMCG00013003 NA coding downstream 561661 16146243 ~ 16154855 (-)
AMCG00013001 NA coding downstream 588283 16108615 ~ 16128233 (-)
AMCG00013014 LOC107666920,LOC107706881,LOC107669499 coding upstream 14272 16732929 ~ 16735796 (-)
AMCG00013013 NA coding upstream 37730 16756387 ~ 16768362 (-)
AMCG00013019 NA coding upstream 64996 16783653 ~ 16823491 (-)
AMCG00013021 NA coding upstream 125176 16843833 ~ 16889951 (-)
AMCG00013020 NA coding upstream 203712 16922369 ~ 16979543 (-)
G41538 NA non-coding downstream 92743 16623419 ~ 16623773 (-)
G41518 NA non-coding downstream 382921 16333231 ~ 16333595 (-)
G41510 NA non-coding downstream 498921 16217381 ~ 16217595 (-)
G41506 NA non-coding downstream 508339 16169309 ~ 16208177 (-)
G41460 NA non-coding downstream 680580 16035647 ~ 16035936 (-)
G41612 NA non-coding upstream 428058 17146715 ~ 17146981 (-)
G41627 NA non-coding upstream 583486 17302143 ~ 17302892 (-)
G41647 NA non-coding upstream 758205 17476862 ~ 17477270 (-)
G41648 NA non-coding upstream 759158 17477815 ~ 17479389 (-)
G41655 galk1 non-coding upstream 792476 17511133 ~ 17511904 (-)
AMCG00013018 NA other downstream 77429 16630231 ~ 16639087 (-)
AMCG00012985 NA other downstream 994059 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 2372044 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 3601029 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 3810183 12896520 ~ 12906333 (-)
AMCG00013038 NA other upstream 1161568 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 1211241 17929898 ~ 18046714 (-)
G41807 NA other upstream 1457404 18176061 ~ 18191522 (-)
G41836 NA other upstream 1524093 18242750 ~ 18244093 (-)
AMCG00013051 NA other upstream 1539432 18258089 ~ 18264843 (-)

Expression


Co-expression Network