AMCG00013013


Basic Information

Item Value
gene id AMCG00013013
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16756387 ~ 16768362 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013013
AACTATAAGGaatgtctttttctctctttctatctccaGCTCAGTGAGCGCTATGGGCCGGTGTTGACTGTGTATCTGGGGCGGAAGCGCTGTGTGGTTCTGGTGGGGTACAAGGCTGTCCAAGAGGCTCTGGTGGACCATTCAGAGTCATTTTGTGGGAGGGAGCCCATCCCATTTTTCAACAGAATAAATAGGGGCTATggacTGGGCATCAGTAATGGAGAGCGATGGAGGCAGCTGCGGCAGTTCACTGTGACCACGCTAAGGGACTTCAACATGGGGAAGAACAAATTGGAGACCTGGATTCATGAGGAGGCCAGACACCTGATTGAGGAACTGGAGTACACAaaggggTCTCCCAGTGACCCTACACTCCTGTTGAATCTCTCAGTGTCCAATGTGATCTGCTCTCTTGTGTTCGGGTCACGCTTCGACTACCAGGACCAGAGGTTTCTAaggctgctgcagctgctgaaagAGATGGTGCATGGCATGAGAGGGCCCTGGGTCCAGCTGTACAACACTTTCCCTACCATCATGGACCTGCTGCCCGGGCCGCACAAGAACGTCTTTGCTAGTGCCCAGCAGCTGGCTGATTTCATGGAGGATTCCGTGAAGGAGCACAAGCAGACGCTGAGGTCCACCCGCCCTCGGGACTTCATCGACTGCTTCCTGCTCCGACAGGAACAGGAGAAGAACAATTCTGATAGTGAGTTCAACTCTCATAACCTCATTTACACAATCCTGGGTCTGTTCATCGCTGGCACAGAGACCACCAGCACAACACTGAGATACATTCTGATGCTGCTTATCAAGTACCCACAAGTGCAAGAGAGGATTCAGCAGGAGATTAAGGCTGTGATCGGGGCACAGCGTCGCCCAGCCCTGGAGGACCGCACAGCCATGCCCTTCACAGATGCAGTGATCCACGAGTCTCAGCGGCTCCTGGACACTGTGCCCATGAACCTGCCCCACATGGCCACCCAGGACATCTTCTTCAGGGGCTACACTATCCCCAAGGGCACCATGGTCATCCCCTTGCTTCACTCGGTACTGCAAGACCAGGAGCACTGGGTCTCCCCAGATGCCTTCAACCCCCATCACTTCTTGGATGAGCAGGGCCGCTTCAAGAGGCACCCAGCTTTCATGGCCTTTTCTGCAGGGAAGCGTGTCTGTGCGGGGGAGAACCTGGCCCGAGCCGAGCTCTTCATCTTCCTGGTGTCCCTGCTGCAGCGCTTCTCCTTCAGTTGTCCACTGGGGCCGGCATCCATCTGCATCACCCCAGAACGCAGTGCCTTCGCAAGTGTACCACAATCCTACCAGCTCATTGCCACACCCCGGTGAAACCAGACAATGACTACAGACTtactggagaaaaataaatacctaaacCCCATTTTGCCAAATTACAAGGCTGAGATGTGCCCCACCCACATTCTGTCACCGAGCCCTCTTCATGGACCCAGTCAGTTTTTATAGGGATGCATTTTCAGGGGAGCACACAAAAGACACCATCCAATGCATCCACCACTGATTTGCATGTGAAGTGcatgaaaatgcaatttttaTCCAAGTTCtataaaacaaagcagttaGTTAAAATTGGTTCAGTTTGATCTAGAACCTCGTTAGAAGACTAAAACTATTAATCATGAGTGGCATTTACCTTGTCATTCACTTCTGGTGactaattatataataatcgtgatcaaacacacacagaaatgtatgCTGTAGTTGGCTTCTGTTTTACCCTGCTATGGAAAGAAGTTTGattctttacaaaaaatatgtattttagagCAAAAATGCAGAATTGTACATTATGGTTGACCTTCAAAATAATTTTGTCCCGTCATTTTGGATTTGGGATGTGTCCAATGGGACAAATTTGAATAACTCAGGAAGAAAAAGCCATCCGTCCAAATAAATGAAAGTCCATATTACTactataaattaaatgcatgcctAGCCTCCATTGTTGTAAaggatattatttattttgagtacATAACCAGATGGCAGCAGTGTCactataattattaaaataatgacaaataaaatgtgtaaatatttgggttactgtgtgttttcctttaacgtcttgaattgaattaatcCAAAAGATGCTACATGtgatttttaatcaaaacagagatgtgtttactgtatttttaaatacaaaatagatcAACATATGTGGtatcttttacattttcatgatgaaagtcttaataaaatatatccCTTGCAGTAGTATCATGTGATTAAAAAAGTAACTAAATAGCTTTACAAAAGTAAACCATAGACATAATACTATTCTGAGCTGTGTCTTTAgccttattttctctctgttcaGCAGTTGATTATATGCCTTACTGCCTATTGGTGGGGGGCAAATCTGGTGTAATGTGACTGGATGATCAGGAGCAGCGGCAGCCCGCCATTAGGGGCCAGTGGGGCTGGCTGAGGAGACAAATTAGCCTTGAACGGTGACTGGCAGGCAGCACTGCCTGTTAGCCACATCGTAAAAACACCTCACACGAAAACCCGCCTCCTAcgacttttacattttttttctcaataatgcattttcaaattgaaaactaCGGCAAGACTAACTGCAGCAGCACAGTATGACTTGAAATGGTGAGTTGATTTCACTTTCCAATAATATAGACTTTGAACAAATATGCCAGATAAATACAGAACCATTTTGtcataaaatgaatacattctctttcaaaaattatatttcatagtGGTTGGTTTATGTATTGTAGTATGCAGGGGTTGGTCTCTTATCGACTCATTACTTCCTTATTCGAACATTTATAATCAATCTCTCTTGTgacctttttatattttgcgTTATCATGTACCTTTATTGGGACAggttacaatgtaaatatttgatttgctCTTAAAAAAGTATAACCTTAAATATCAACTAAAAAGATTATGATACTATgaatatatcaataatacaatGTGGTTGGTAGctctaaaatatttgtatttgtttataaaggggCGAGTTTGCTTAATGATGTAtcctgcttaaaaaataaacttttactACACTCTA

Function

GO: NA

KEGG:

id description
K07416 CYP2F; cytochrome P450 family 2 subfamily F

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013013 True 3088 mRNA 0.43 8 16756387 16768362

Neighbor

gene id symbol gene type direction distance location
AMCG00013014 LOC107666920,LOC107706881,LOC107669499 coding downstream 20591 16732929 ~ 16735796 (-)
AMCG00013011 NA coding downstream 37730 16716516 ~ 16718657 (-)
AMCG00013012 NA coding downstream 69083 16678160 ~ 16687304 (-)
AMCG00013008 LOC101481179,LOC102780800,LOC107388280,LOC103369862,LOC107743796,LOC107577513,LOC107691210 coding downstream 222540 16532750 ~ 16533847 (-)
AMCG00013007 LOC108274136,LOC107754112,LOC107743783,LOC107691214,LOC107566616,LOC107568947 coding downstream 505177 16250137 ~ 16251210 (-)
AMCG00013019 NA coding upstream 15291 16783653 ~ 16823491 (-)
AMCG00013021 NA coding upstream 75471 16843833 ~ 16889951 (-)
AMCG00013020 NA coding upstream 154007 16922369 ~ 16979543 (-)
AMCG00013022 NA coding upstream 361045 17129407 ~ 17135059 (-)
AMCG00013026 spata20,LOC104963383 coding upstream 635017 17403379 ~ 17412455 (-)
G41538 NA non-coding downstream 132614 16623419 ~ 16623773 (-)
G41518 NA non-coding downstream 422792 16333231 ~ 16333595 (-)
G41510 NA non-coding downstream 538792 16217381 ~ 16217595 (-)
G41506 NA non-coding downstream 548210 16169309 ~ 16208177 (-)
G41460 NA non-coding downstream 720451 16035647 ~ 16035936 (-)
G41612 NA non-coding upstream 378353 17146715 ~ 17146981 (-)
G41627 NA non-coding upstream 533781 17302143 ~ 17302892 (-)
G41647 NA non-coding upstream 708500 17476862 ~ 17477270 (-)
G41648 NA non-coding upstream 709453 17477815 ~ 17479389 (-)
G41655 galk1 non-coding upstream 742771 17511133 ~ 17511904 (-)
AMCG00013018 NA other downstream 117300 16630231 ~ 16639087 (-)
AMCG00012985 NA other downstream 1033930 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 2411915 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 3640900 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 3850054 12896520 ~ 12906333 (-)
AMCG00013038 NA other upstream 1111863 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 1161536 17929898 ~ 18046714 (-)
G41807 NA other upstream 1407699 18176061 ~ 18191522 (-)
G41836 NA other upstream 1474388 18242750 ~ 18244093 (-)
AMCG00013051 NA other upstream 1489727 18258089 ~ 18264843 (-)

Expression


Co-expression Network