Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013016 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 16747170 ~ 16757092 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013016 | True | 402 | mRNA | 0.55 | 4 | 16747170 | 16757092 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013010 | NA | coding | upstream | 37159 | 16708272 ~ 16710011 (+) |
| AMCG00013017 | NA | coding | upstream | 69839 | 16642916 ~ 16677331 (+) |
| AMCG00013009 | NA | coding | upstream | 309309 | 16436064 ~ 16437861 (+) |
| AMCG00013006 | NA | coding | upstream | 563750 | 16155679 ~ 16183420 (+) |
| AMCG00013005 | NA | coding | upstream | 601745 | 16137999 ~ 16145425 (+) |
| AMCG00013023 | kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 | coding | downstream | 712514 | 17469606 ~ 17476756 (+) |
| AMCG00013032 | NA | coding | downstream | 752195 | 17509287 ~ 17517737 (+) |
| AMCG00013029 | NA | coding | downstream | 776753 | 17533845 ~ 17557349 (+) |
| AMCG00013031 | NA | coding | downstream | 805638 | 17562730 ~ 17563944 (+) |
| AMCG00013033 | NA | coding | downstream | 826033 | 17583125 ~ 17591701 (+) |
| G41566 | NA | non-coding | upstream | 11322 | 16735362 ~ 16735848 (+) |
| G41565 | NA | non-coding | upstream | 13993 | 16732904 ~ 16733177 (+) |
| G41564 | NA | non-coding | upstream | 15877 | 16730067 ~ 16731293 (+) |
| G41537 | NA | non-coding | upstream | 123520 | 16623420 ~ 16623650 (+) |
| G41536 | NA | non-coding | upstream | 163471 | 16583402 ~ 16583699 (+) |
| G41577 | NA | non-coding | downstream | 16257 | 16773349 ~ 16776045 (+) |
| G41611 | NA | non-coding | downstream | 389623 | 17146715 ~ 17146976 (+) |
| G41638 | NA | non-coding | downstream | 707809 | 17464901 ~ 17466059 (+) |
| G41649 | NA | non-coding | downstream | 723487 | 17480579 ~ 17486682 (+) |
| G41683 | NA | non-coding | downstream | 820353 | 17577445 ~ 17577756 (+) |
| AMCG00013015 | NA | other | upstream | 17637 | 16719355 ~ 16729533 (+) |
| G41264 | hbp1,LOC108230206,LOC107701066 | other | upstream | 928828 | 15477179 ~ 15818342 (+) |
| AMCG00012987 | NA | other | upstream | 955543 | 15782364 ~ 15791627 (+) |
| AMCG00012982 | ssbp1,LOC106576077,LOC106609216 | other | upstream | 1116167 | 15620735 ~ 15631003 (+) |
| AMCG00012978 | NA | other | upstream | 1173702 | 15570906 ~ 15573468 (+) |
| AMCG00013047 | NA | other | downstream | 1401750 | 18158842 ~ 18230238 (+) |
| AMCG00013068 | NA | other | downstream | 2210337 | 18967429 ~ 18974362 (+) |
| G41978 | NA | other | downstream | 2268469 | 19025561 ~ 19029278 (+) |
| G42326 | LOC105030495,LOC106938339,LOC103143718,LOC103461378 | other | downstream | 4512583 | 21269675 ~ 21278728 (+) |
| AMCG00013118 | LOC106594791 | other | downstream | 4528939 | 21286031 ~ 21471560 (+) |
