AMCG00013019


Basic Information

Item Value
gene id AMCG00013019
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16783653 ~ 16823491 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013019
ATGATCGATAATGATGTTCTTACACTGATGTCCTGTCCTTACCTACCTATTCCTTCTGTAGAAGCGCAGTGTAAACCCTACTATTCTGATTACTCCCCAACCCGCCTTCTCATCCACAAGATGTGCACCAGCCACTACCTGGACCTCTTCATCACTGTGGTGATAGGCCTCAACGTTATTACCATGGCAATGGAACACTACCAACAACCCAAGGTTTTAGATGAAGCTCTGAAGATCTGTAACTACATCTTCACCATAGTCTTCGTTCTGGAGTCTGTCTTTAAACTGGTGGCTTTTGGGTTCCGGCGATTTTTTAAGGACAGGTGGAACCAACTCGATCTGGCCATTGTCCTTCTCTCCATCATGGGCATCACTCTGGAGGAGATTGAGGTCAATGCCTCCCTTCCCATCAACCCCACCATCATCCGCATCATGAGGGTCCTGCGCATCGCCAGGGTGCTGAAGCTGCTCAAGATGGCTGTCGGGATGAGAGCCCTGCTGGACACTGTGATACAAGCCCTGCCTCAGGTCGGGAACCTGGGACTTCTCTTCATGCTGCTCTTTTTTATCTTTGCCGCCCTGGGAGTGGAGCTGTTTGGGGACCTAGAGTGTGACGAAGATCACCCCTGCGAGGGCCTGGGCCGACACGCCACCTTCAGGAACTTTGGGATGGCGTTCCTCACCCTGTTCCGCGTGTCCACAGGAGACAACTGGAATGGCATAATGAAGGACACACTGCGGGACTGCGGCCAGGACACCAACCCCTGCTACAACACGGTGGTGTCGCCCATCTACTTCGTGTCATTCGTGCTGACGGCACAGTTTGTGCTGGTGAACGTGGTGATTGCCGTGCTGATGAAGCACCTGGAAGAGAGCAACAAGGAGGCCAAGGAGGAGGCAGAGATGGAGGCAGAGttggagctggagctgcagaGTTTCAACCACCCCGCCATCATGGGGGAGGGCCTTCCCTGTATCGCCGGGGAAATCAGAGACCGACCAGACAGCCCCGGGGGAGGGGCCTGTGATCCCACACATGTCAAAGTGgactctcctctctccctggaTCCCCCCATGCGGAGGCACTTGTTTGACACAGTCTCCCTGCTGATCCAGGGATCCCTGGAAGGAGAGCTCAGCCTCATGGACAATCTCTCAGGCTCCGTCTATCACCACTACGCCCTCCCACCACTGCCCAGCAAGTGCTCCACCGAGAAACAGATTCCTCTAGCGGAGATGGAGGCTCTGTCTCTGACATCTGAGAAATCCTGGTCCCTAGCTCTGACGGATGACTCTATGCCTGACGATATTAACACTCTCTTACTAACTACTCTGGAGTGCAATCCCGAGCTCTCAGAGGTGGATGGGGAGCCAGGCGAGCAGCTGACCGAGAACCTGCTGTGCGTGAGGAAGCCCTCGGTGGGCCGAACGCACTCCCTGCCCAATGACAGCTACATGTTCCTGCCACTCCACCCCACAGGCGCCCCCTCACCCCGCACTGCGTCACCTCAGAAGGGTCAGTCAGGTAAGCCTGCACTTTTTATCAGCTCCACCACCTCAGTGCAGTCCCAGCCAGCGGACAGCAGCACTCAGCACTTGGCGGTGCCCACTGACCTCTTCCGCCCCATCAGCCCTCACAGCTACTCTGACTCTGAGAGCATCCCCCGTATCCCACCCCCGCGCCGGGCACAGACCCTCAACCGCACCCTGCGCAGACAGGTGGCGGTGATCAATGACTCCCTGGACACTTTGTACACTGAAGCGGTAGAGGAGGGGGCAGCGGGGCAGAGCCGGAACAGCGAACTGTCTGCCTCGGGCTTCCCCTCCCAGCCGGCTGTGCTGCTGGTGCCCGCCACCCCCGGGGCATCCCCTAAACTGGCACGCTCCAGCGTTCGCACGCAGCACAATCAGAGCAACATGCCCAAGTGCCCCTCTCCCAGCCCATCCCCATCGccatccccccctcctcctccacctcccccgCTCCCCCCCACCAGGAGGAATCCCTTCGGGGAGCAGGAGGACACCGTGGACCAGGAGGTGTCGCGCATCATTACGGCCGGGCTGGGCCTGGGCGAGGGCTCGGACCGAGGGCCCTGTCTCCGCCAGCTGAAGAAGTACCACAGTGTGGATACTCAGGGCCGACGCCTCCTGCTGACCCGGCCCGCCTCCTGGCTGGACGACCCGCGCCGCCACTCCATCGAGATCTGCTCGTCCGTGGAGAGCAGCCCCCAGCGCAGCTCGGGCTCCTCGGGCTTCGTCTCGCGCGCCGAGAGTTTCCAGCAGCCCTCGCCGCGGCGTAAGAAGAAGATGAGTCCCCCCTGCATCTCTGTGGAGCCTCCAGAGAGCCAGGAGCTCCAGCCTGGCTTCCACACGGGGCTGCCCCCACCGCCAGGGAGGGACACTTGCCTGAGGAGGCGGGCACCGTCCTGCGACTCCAAGGACTCGATAGACCTGGCTGGGGAGGGTGTGCCCCCCGACGGCTCCCCCAACCCAAAGCTATTGACTCTTCCCAGTTTCTCCTTCGAGCAGACTGACGGCGAACATTAA

Function

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013019 True 2550 mRNA 0.60 12 16783653 16823491

Neighbor

gene id symbol gene type direction distance location
AMCG00013013 NA coding downstream 15291 16756387 ~ 16768362 (-)
AMCG00013014 LOC107666920,LOC107706881,LOC107669499 coding downstream 47857 16732929 ~ 16735796 (-)
AMCG00013011 NA coding downstream 64996 16716516 ~ 16718657 (-)
AMCG00013012 NA coding downstream 96349 16678160 ~ 16687304 (-)
AMCG00013008 LOC101481179,LOC102780800,LOC107388280,LOC103369862,LOC107743796,LOC107577513,LOC107691210 coding downstream 249806 16532750 ~ 16533847 (-)
AMCG00013021 NA coding upstream 20342 16843833 ~ 16889951 (-)
AMCG00013020 NA coding upstream 98878 16922369 ~ 16979543 (-)
AMCG00013022 NA coding upstream 305916 17129407 ~ 17135059 (-)
AMCG00013026 spata20,LOC104963383 coding upstream 579888 17403379 ~ 17412455 (-)
AMCG00013024 NA coding upstream 590573 17414064 ~ 17462961 (-)
G41538 NA non-coding downstream 159880 16623419 ~ 16623773 (-)
G41518 NA non-coding downstream 450058 16333231 ~ 16333595 (-)
G41510 NA non-coding downstream 566058 16217381 ~ 16217595 (-)
G41506 NA non-coding downstream 575476 16169309 ~ 16208177 (-)
G41460 NA non-coding downstream 747717 16035647 ~ 16035936 (-)
G41612 NA non-coding upstream 323224 17146715 ~ 17146981 (-)
G41627 NA non-coding upstream 478652 17302143 ~ 17302892 (-)
G41647 NA non-coding upstream 653371 17476862 ~ 17477270 (-)
G41648 NA non-coding upstream 654324 17477815 ~ 17479389 (-)
G41655 galk1 non-coding upstream 687642 17511133 ~ 17511904 (-)
AMCG00013018 NA other downstream 144566 16630231 ~ 16639087 (-)
AMCG00012985 NA other downstream 1061196 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 2439181 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 3668166 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 3877320 12896520 ~ 12906333 (-)
AMCG00013038 NA other upstream 1056734 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 1106407 17929898 ~ 18046714 (-)
G41807 NA other upstream 1352570 18176061 ~ 18191522 (-)
G41836 NA other upstream 1419259 18242750 ~ 18244093 (-)
AMCG00013051 NA other upstream 1434598 18258089 ~ 18264843 (-)

Expression


Co-expression Network