AMCG00013021



Basic Information


Item Value
gene id AMCG00013021
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16843833 ~ 16889951 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00013021
ATGAAGAATCATGGCGTGTGTTTGCCTTACACTTACCTCAGCTCTCACTCTGTAGCAGCAACACCTGTGGGCGGCCAAGAAGTTTCCAAGAAGGACGATATTGGTGGACAGTTAAGCTGTATTCAGCTGCCTGTCGACTCCGGGAAAGGCAAACTGGGAGTAAGGACACAGGTAACCAAGCCCTGGCCTGACACTGGCAACCTTCTGCCTGCATCAGTGAAGCAGTTTGAACAGGGCCGATGGCAGAGTGCTGGGCATGCTAGCATGGAGGACATGTGCGGAAGCAAGAAGGATGTCAGTGCCTCAGCGGTGGTGCCCATCAATGGCCACGTGGACATGAAGACCAGCCTGACGCCTCCCCTCATCACCCACACCGCCGCCACCCCCATGCCCGTCCCCAAGAGCACGGGTATCAGCGACCTGCCGCCGGACTCTCGACGGGGCAGCAGCGTGTCTGTCGACCCCAACTGCTACGACATCAAGTCTCCGGTCAGTGACTCTGCTGCCCCACAGTCCAGCGCCCGCAGCTCCCCCTATGCCCCCtggagcacagccagcagctgGAACAGCCGACGCTCGAGCTGGAACAGCCTGGGCCGGGCCCCCAGCCTGAAGCGCCAGAAACGGCAGTCAGGGGAGCGGCGCTCGCTGCTGTCTGGTGACGGGCAGTCCAGCTCGGAGGAGGGCGAGGGCTGCTCGGAGGGCGAGGGTGGCTCCATCAGCGACTCCCTGCGCCGCCACCGCAATGAGTCCCTGGAAACCAAAAGCTCCTTTGACCTGCCGCCCGACACCCTGCAGGTGCCCACCTACCTGTACCGCTCAGCCAGCATGCACAGCGCCCGCCCCCCCTTGTCCGAGCACCACGACTGCAATGGCAAGACCTCCCCCACTGCTGCTACCGGCCCCGGGGCCCAGCTCTCCCTGGACGACCCCCACAGCGATGACGACAACGGAGATGACGAGGCCAACATGGTGAGAGGACTGGTTTATACTAGATGGTGTGACCGAGGGGACCGACACTTCAGGTCAAAGATCAGCTGCAGGGGCCGCAGAgccaggattcagaagtggtttgAGAAGCGTCAGCCAGAGTGGTGTCGCCGGAGGAGCTCCTGGGCGCTCTACATATTCCCCAGTGACTCCAAGTTTCGGATGACCTGCAATAAAATCATCACGCACAAGATGTTCGACCATATTGTCCTGGTGATTATCTTCCTGAACTGCATCACCATCGCCATGGAGAGGCCCAAGATCGAACCCCTCAGCCCGGAGCGCATATTCCTGACGTTGTCCAACTACATCTTCACAGTGATCTTCTTGGCCGAGATGACAGTAAAGGTGGTGGCGATGGGCTGGTGCTTTGGCAAGAAGGCCTACCTGAGGAGCACCTGGAACATCCTGGATGGGGTTCTGGTCATGATCTCGGTCATCGACATCCTGGTCTCCTTGATCTCCAACAGCGGCACCAAGATCCTCGGTATGCTGAGGGTCCTGCGCTTGCTCCGGACCCTGCGCCCCCTCAGAGTCATCAGCCGTGCACCAGGTCTGAAGCTGGTAGTGGAGACCCTGATGTCCTCTTTGAAGCCCATCGGCAACATCGTGGTCATCTGCTGTGCATTCTTCATTATTTTCGGCATCCTCGGGGTACAGCTCTTCAAAGGGAAGTTCTTTGTATGCCAAGGGGAGGACACCAGGAACATCACCAACAGATCTGATTGTCTGATAGCCAACTACAAGTGGGTCCGACACAAATACAACTTTGACAATCTGGGCCAGGCATTAATGTCCCTGTTTGTGCTGGCCTCCAAAGATGGATGGGTGGACATCATGTATGACGGACTGGACGCTGTGGGAGTTGACCAGCAGCCTGTCATGAACTACAACCCCTGGATGCTACTCTACTTCATCTCCTTCCTGCTCATCGTGGCCTTCTTCGTGCTCAACATGTTCGTGGGCGTGGTGGTGGAGAACTTCCACAAGTGCCGGCAGCACCAGGAGGCCGAGGAGGCCAAGCGTCGTGAGGAGAAAAGGCTCAAGAggatggagaaaaaaagacGCAGTAAGGAGAAACAGCTGGCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00013021 True 2079 mRNA 0.58 14 16843833 16889951

Neighbor


gene id symbol gene type direction distance location
AMCG00013019 NA coding downstream 20342 16783653 ~ 16823491 (-)
AMCG00013013 NA coding downstream 75471 16756387 ~ 16768362 (-)
AMCG00013014 LOC107666920,LOC107706881,LOC107669499 coding downstream 108037 16732929 ~ 16735796 (-)
AMCG00013011 NA coding downstream 125176 16716516 ~ 16718657 (-)
AMCG00013012 NA coding downstream 156529 16678160 ~ 16687304 (-)
AMCG00013020 NA coding upstream 32418 16922369 ~ 16979543 (-)
AMCG00013022 NA coding upstream 239456 17129407 ~ 17135059 (-)
AMCG00013026 spata20,LOC104963383 coding upstream 513428 17403379 ~ 17412455 (-)
AMCG00013024 NA coding upstream 524113 17414064 ~ 17462961 (-)
AMCG00013025 atp5h,LOC101487002,LOC107587968 coding upstream 574538 17464489 ~ 17468508 (-)
G41538 NA non-coding downstream 220060 16623419 ~ 16623773 (-)
G41518 NA non-coding downstream 510238 16333231 ~ 16333595 (-)
G41510 NA non-coding downstream 626238 16217381 ~ 16217595 (-)
G41506 NA non-coding downstream 635656 16169309 ~ 16208177 (-)
G41460 NA non-coding downstream 807897 16035647 ~ 16035936 (-)
G41612 NA non-coding upstream 256764 17146715 ~ 17146981 (-)
G41627 NA non-coding upstream 412192 17302143 ~ 17302892 (-)
G41647 NA non-coding upstream 586911 17476862 ~ 17477270 (-)
G41648 NA non-coding upstream 587864 17477815 ~ 17479389 (-)
G41655 galk1 non-coding upstream 621182 17511133 ~ 17511904 (-)
AMCG00013018 NA other downstream 204746 16630231 ~ 16639087 (-)
AMCG00012985 NA other downstream 1121376 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 2499361 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 3728346 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 3937500 12896520 ~ 12906333 (-)
AMCG00013038 NA other upstream 990274 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 1039947 17929898 ~ 18046714 (-)
G41807 NA other upstream 1286110 18176061 ~ 18191522 (-)
G41836 NA other upstream 1352799 18242750 ~ 18244093 (-)
AMCG00013051 NA other upstream 1368138 18258089 ~ 18264843 (-)

Expression



Co-expression Network