AMCG00013032


Basic Information

Item Value
gene id AMCG00013032
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 17509287 ~ 17517737 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013032
GCTGCGCTTCAGTGGGCGGCGCAGACGCGGTGCTCTGAGTGAAGCGCAGCTCCGTGCTtgttacacagacacactgcagccGCCGTCGCTTTACCTGACCAGCGTGTTTTTCGCGAGCAGCTCTTGCGGACTCGGCGATGGCCAGTTGTCCTGTGCCCAGCGTGTCCTCGGTCGTGGCCGGGGCTCGGCAGGTCTACCGGGAGAGCTTCGGGGCCTCGGAGCCAGTGGTGGCGGTCTGTGCGCCGGGGAGGGTCAATCTGATCGGAGAACACACCGACTATAACCAGGGCTTCGTGCTCCCTATGGCGTTGCCGTTGGTGACTGTGATGGTCGGCAGTCCTACTCCTGACCGCAGCGTATCCATTGTGACCGTGGCTGAGGGGGCGGATGAACCCCGGCGAGTGGATTTCGTGTTGCCTAACGACAGTGCCACCCCCATTGCCCCAGGGATGCCCAAATGGGCCAATTATGTGAAAGGAGTCCTACAGCATTACAGAGcgGGGCCCCTGCCTGGGTTCCAAGCAGTGTTAGCCAGCAGCGTGCCACTAGGGGGCGGCCTGTCCAGCTCAGCCTCCCTGGAAGTTGCGGTATACACATTCCTGCAGCAGCTCTGCCCAGATGATGGCGATGCCGTGTCGAAGGCGCTGGCCTGTCAGAAAGCGGAGCACACTCACGCTGGCATGCCTTGCGGCATCATGGACCAGTTCATCTCAGTGCTGGGCAAAGACGGGCATGCTCTCCTCATTGACTGCAGGTCCCTGGAGGCTACTCTGGTGCCGCTCACAGACCAGGGGCTGGTAATCCTCATCACCAACTCCAACGTGCGCCACTCCCTGACGGGCAGTGAATACCCCAGCCGGCGGCGGCAATGTGCCCAGGGGCAACTGGACAAGGAGACGTACCGGCGGGCACGCCACGTGATTGAGGAGATCGGACGCACGGAGCGTGCAGCAGCAGCGCTCAGAGAGGGGCGGTACCACGAGTTcggagagctgatggtggataGCCACAATTCTCTCAGGGACCACTATGAGGTCAGCTGTCCTGAGCTGGATGAGCTGGTTGCCGCGGCGACTGAGGTGGAGGGCGTGTACGGAAGCAGAATGACAGGCGGGGGGTTCGGGGGCTGCACAGTCACCTTGCTGGAGGCCGCCGCTGTGGACCGAGCTGTGCAGCACATCAAGATTACAGAAGATAACCGAATGAATGAGACCATGAAACTTCATGAATAA

Function

GO: NA

KEGG:

id description
K00849 galK; galactokinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013032 True 1232 mRNA 0.61 8 17509287 17517737

Neighbor

gene id symbol gene type direction distance location
AMCG00013023 kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 coding upstream 32531 17469606 ~ 17476756 (+)
AMCG00013016 NA coding upstream 752195 16747170 ~ 16757092 (+)
AMCG00013010 NA coding upstream 799276 16708272 ~ 16710011 (+)
AMCG00013017 NA coding upstream 831956 16642916 ~ 16677331 (+)
AMCG00013009 NA coding upstream 1071426 16436064 ~ 16437861 (+)
AMCG00013029 NA coding downstream 16108 17533845 ~ 17557349 (+)
AMCG00013031 NA coding downstream 44993 17562730 ~ 17563944 (+)
AMCG00013033 NA coding downstream 65388 17583125 ~ 17591701 (+)
AMCG00013030 NA coding downstream 83641 17601378 ~ 17638696 (+)
AMCG00013035 NA coding downstream 139382 17657119 ~ 17688640 (+)
G41649 NA non-coding upstream 22605 17480579 ~ 17486682 (+)
G41638 NA non-coding upstream 43228 17464901 ~ 17466059 (+)
G41611 NA non-coding upstream 362311 17146715 ~ 17146976 (+)
G41577 NA non-coding upstream 733242 16773349 ~ 16776045 (+)
G41566 NA non-coding upstream 773439 16735362 ~ 16735848 (+)
G41683 NA non-coding downstream 59708 17577445 ~ 17577756 (+)
G41740 NA non-coding downstream 403433 17921170 ~ 17985309 (+)
G41743 NA non-coding downstream 412198 17929935 ~ 18013678 (+)
G41744 NA non-coding downstream 486211 18003948 ~ 18018513 (+)
G41810 NA non-coding downstream 722255 18239992 ~ 18240369 (+)
AMCG00013015 NA other upstream 779754 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 1717660 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 1878284 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 1935819 15570906 ~ 15573468 (+)
AMCG00012973 NA other upstream 1939344 15566493 ~ 15569943 (+)
AMCG00013047 NA other downstream 641105 18158842 ~ 18230238 (+)
AMCG00013068 NA other downstream 1449692 18967429 ~ 18974362 (+)
G41978 NA other downstream 1507824 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 3751938 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 3768294 21286031 ~ 21471560 (+)

Expression


Co-expression Network