AMCG00013033


Basic Information

Item Value
gene id AMCG00013033
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 17583125 ~ 17591701 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013033
ATGAAGAAATTGAAGCCGAGGAGCTTGTTCCTCCTGGAGGTGGATGGTTTAGTTTACCAAAcatctaatgtattatttgtccacagtggggtggtggtggggactTCCCTGTCCCAGTACCTTCTGGAGAAGTCTCGGGTTGTTTTCCAGGCCAGTGGGGAAAGGAACTATCATGTGTTTTACGAGATGCTGGCCGGACTGAGTGAGCAGTGCAAAGAAGACCTCTACCTGCAGGGAGCAGAGACATACTTCTATCTCAATCAGAACGACTCGTATGAGCTGGCCGTGATCAATGACTCGGAGACGCGCATCGTGGCCAGTCTGCTGCAGGTCTCGGCCGACATCCTGCAGACCGCCATCACTCACCGCGTCACGGAGACCTCGTACGATAGGATCTACTGCCCCCTGTCTGTAGAAAGTGCCATAGAATCCAGGGACGCCATTGCCAAGGCCTTGTATTCGGTGTTGTTCGACTGGCTGCTGGACAGGATCAACGAGTGGCTGGTACCCAGAGAGATGGACAGCTCCGTGGGCATCGTGGACATCTATGGGTTTGAGGACCTGGGGGTGAACAGCTTCGAGCAGCTGTGTATCAATTATGCTAATGAACAGCTACAGCACTTCGTAAACCGGGCGGTAGTCTCCCAGGAGCAGGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013033 True 660 mRNA 0.53 7 17583125 17591701

Neighbor

gene id symbol gene type direction distance location
AMCG00013031 NA coding upstream 19181 17562730 ~ 17563944 (+)
AMCG00013029 NA coding upstream 25776 17533845 ~ 17557349 (+)
AMCG00013032 NA coding upstream 65388 17509287 ~ 17517737 (+)
AMCG00013023 kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 coding upstream 106369 17469606 ~ 17476756 (+)
AMCG00013016 NA coding upstream 826033 16747170 ~ 16757092 (+)
AMCG00013030 NA coding downstream 9677 17601378 ~ 17638696 (+)
AMCG00013035 NA coding downstream 65418 17657119 ~ 17688640 (+)
AMCG00013040 NA coding downstream 257055 17848756 ~ 17852896 (+)
AMCG00013041 NA coding downstream 274513 17866214 ~ 17889767 (+)
AMCG00013045 NA coding downstream 559751 18151452 ~ 18154122 (+)
G41683 NA non-coding upstream 5369 17577445 ~ 17577756 (+)
G41649 NA non-coding upstream 96443 17480579 ~ 17486682 (+)
G41638 NA non-coding upstream 117066 17464901 ~ 17466059 (+)
G41611 NA non-coding upstream 436149 17146715 ~ 17146976 (+)
G41577 NA non-coding upstream 807080 16773349 ~ 16776045 (+)
G41740 NA non-coding downstream 329469 17921170 ~ 17985309 (+)
G41743 NA non-coding downstream 338234 17929935 ~ 18013678 (+)
G41744 NA non-coding downstream 412247 18003948 ~ 18018513 (+)
G41810 NA non-coding downstream 648291 18239992 ~ 18240369 (+)
G41812 NA non-coding downstream 648767 18240468 ~ 18242583 (+)
AMCG00013015 NA other upstream 853592 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 1791498 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 1952122 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 2009657 15570906 ~ 15573468 (+)
AMCG00012973 NA other upstream 2013182 15566493 ~ 15569943 (+)
AMCG00013047 NA other downstream 567141 18158842 ~ 18230238 (+)
AMCG00013068 NA other downstream 1375728 18967429 ~ 18974362 (+)
G41978 NA other downstream 1433860 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 3677974 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 3694330 21286031 ~ 21471560 (+)

Expression


Co-expression Network