AMCG00013035


Basic Information

Item Value
gene id AMCG00013035
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 17657119 ~ 17688640 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013035
ctgctgctcaacCTCTTCCTCATCGGGCGGCAGGAGAGGCTGAAGAAGAGTGAGATCGTGCGCAGGCTGCAGGCCATCATTGATGGGCTGAATGACACGATTGGCAGTGTGGAGCCGGTGAAGTGGGCACCCTCGCTGTACCCAGACCTTTATATGCCCCCCTCGCCCTCCTGGTCTCTGCACTGGGCGTACCGGGATGGCCAGCTGGTGAATGTGCCCGTCAGCCTGTTGGTGGAGGGGGATGTGATCGCCCTGCGCCCCGGCCAGGAGTCTTTCACCTCGCTGCGTGGCATCAAGGATGATGAGCACATCGTCCTGGAGCCCGGGGACCTGTACCCCCCattctcccctcccccctccccccgggGCAACGAGAAGAAGGGCCCACAGAGCCCCCAGCAGTTCCGCCTCTTCAGGGTGGTCCGCACCCCCGTCCTGGACAGCGTCAGGAACAGCCTGGATCAGGCCCTGTGTCGGCCCGTGACGGCCCTGAACAACGAGAGGTTTACAGTGCAGTCCATCATGGCCAAGTTCGTCTGCCTGGTCGTGCTGGTGGCTTTCCTGACAGCCAACACAGTGCGTTATTTCATGGATGCCCCTGGACTCACACCCGGGCAGTTCAATTTCATCCAGCTCCAGGTGATGGGGGTGCTGCCCATCCTTCCACTGCTGTTCCCTGTGATGTGGGTGCTGGTAAACGCCTACGGAGAGGCCCGCGTCCTGGCTGAGTCCAGTCGGACCTCTCCCACCAGCCTGCTGGCTAAGTTCTCAGAGGACACTCTAAGCAGCTACACGGAGGTGGTGTCTTCACAGGAGATGCTGCGCTGCGTGTGGAGGCACTTCCTGAGTGTCCTGAGGGGGCAGTCGGGGACGCTGTGCTACACCTCCAGTCTGCTGCACACCCTGGGCTCTGTCACTgtgctgtgctgtgtggacAAGCAGGGCATCCTGTCCTGGCCCAACCCTAGCCCAGAGACAGTTCTGTTCTTCAGCGGGAGGGTGGAGCTGCCGCATGGCAGCCAGGAGGACCTGAAAGACGACCTCTCCGTGGGCTCCTTCTGCCGGCTGGATGGGGAGGAGGAGCGAGACGAGGCCCAGGAAGCAGATGCCCTCTTATGTATGCCCGCTCTGGACCCCCTCCACAGCGCCCCCGAGCCAGAGCCCAGTGAGACCTCGCATGACACGGCACGCTCCTCGGAGACCATGCGCCCCCGACGCCCCCCACCAGACACCCGGCGCACCAAGCACCCCTCCGGCTCCAACGTCAGCTTCAGCCGGGACACTGAGGGGGGCGAGGAGGAGCCCTCGCAGttttttgggGAGAGCGAGGGCCTGGGCTGCGAGGCAGAGGACTTTGTCTGCGATTACCACCTGGAGATGCTGAGCCTGTCCCAGGACCAGCAGAACCCCGTCAGCATCCAGTTTGACGACTCCAACTGGCACTGCCACCTACCCAGTCTCAAGCCGCTGGGCCTCAACATCCTGCTGAACTTGTGCAATGCCAACGTGACTGAACAGCTCTGCCGCTTCTCCGACCACCTGTCCAACATGGCATTGCAGGAGACCCACGGCTCTGTCCTACCTGTGCATGTGCCCTGGGGGCTCTGTGAGCTCTCCCGCCTCATAGGGTTCACCCCAGGAGCCAAGGAGCTGTTCAAGCAGGAGAACCACCTTACCCTGTACCAGCTGCCTTCGGCCGAGGTGGCCAAGGATGCGCCTCGGAAACTGCTCCACTTCACCAAGAGACAGCCACCCATGAGCCACCTTATTAGTCTTTTCGTCCGTGACACCACTACTAATAACGTTCAGATGCTCTCTCACGGCTCGGCTGACCTCATCCTGGAGGCCTGCACTGATTTTTGGGATGGCGCCGATATCTACCCCCTCTCCGGCTCTGACAGGAAGAAGGTGCTAGACTTTTACCAGCGGGCCTGCCTGTCCGGGTACTGCTCAGCCTTCGCCTACAAGCCCATGCAGTGCACCCTGTCTCCGCAGCTCAACGGCAAGTGTGTGGAGCTGGTGCAGGTGCCTGGCCAGAACACCATCTTTACCAGCTTCGAGCTGCCCGGCACCACGCCCATCAAGCACGGCAGCCGCAGGAACAGCTGGAGCTCTGATGAGGGCATTGGGGAGCCGGTGGAGCGGGAGGACTGCGTCCAGGCGCTCAGCGGGCAGATCTTCATGGGCATGGTGTCCTCGCAGTTCCAGGCACGGCTGGACACGGTCCGGCTCATCGACGCCCTGGTCAACGCCTGCATCCGCTTTGTGTTTGCAGAGAAGATGGGTTTGGAGACAGGCTGGAACTGCCACATCTCCCTGACACCCAACGGTGACGGGCATGGCTGTGACCTGCCCCCCTCCAGCCCCAGCCATGCTGGCTCCCTGCATGATGACCTGCACCAAGACTCCCGGGACGAGGCTGAGGGGCCCCTGCTGCTGGAGGAGGAAGGACACTCGGACCTCATCAGCTTCCAGCCCACAGACAGTGACGTGCCCAGCTTCCTGGAGGACTGCAACAGGgcCAAACTGCCACGTGGCATCCACCAGGTCCGTCCCCACCTGAAAAACATAGACAACGTGCCCCTGCTAGTGCCCCTCTTCACAGACTGCACTCCTGAAACCATGTGCGAGATGATGAAGATCATGCAGGAGAACCGCGAGGTGACCTGCTGCCTGGGGAGCTCGGCCAACTTCAGGAACAGCTGCCTCTTTCTGCAGAGCGACGTCAGCATTGCGCTGGATCCCCTGTACCCCTCACGCTGCTCCTGGGAGACGTTCGGCTACGCGGCCGCCAACAGCCTGGCGCTGGACTCCGAGGAGCTTTCCCCCCTGCGGCTCTCCGGCCTGCTCAACGGCCTGGCCTGCTCCGCATCCTTCCACCAGGAGGAGAGTGTCAGCATGGTCAAGCTCATAGAGCAGGCCCGACACACCACATATGGCATCCGCAAGTGTTTCCTGTTCCTGCTGCAGTGCCAGCTCACCCTCGTCATCATCCAGTTCCTGGCCTGCCTGCTGCAGCTCCCTCCTCCCATCAACATCACTGACATCCTCTGGCTCTCCTGCTTCTGCTACCCACTGCTCAGtgtgtcgTTTCTGGGGAAGCCACCGGACAGCTCTGTGATGACCACGCAGCAGTATTTCCTGGTTTGTTTCCTGCTGAAGTTCAGTCTGACGATCGGCGCTTACCTCGTGGGCTTCGGCTTCACACTTCAAGAATTCTGTGGCAGGAATGGCACCAACTCCACCGTCAACTGCTCCATCATGGTTGCCAGCTCTGACCCAGGGGCCCCCAAGTGGTTTGGGGAACTCTCAAACGGCCTGCTGCTCATACAGAAGGTGATGGCGGGGTTTCTGGCTCTGCACACAGTGGTGATCTCCCTCAGTCACGTCCACCGCTCCAAACCCCTGTGGAGAAAGAGTCCCTTCAGCAACACGTGGTGGTGCCTGACTGTTCCTGTGGTGTTGCTGGGCCAGGTGGTCCAGGCGGTGGTGGATTTCCAGCTGTGGAAGAATCAGCAGTCGCCTGTGACCTTCACCCTGCAGGACATTCCCCTGCTGGTGTGGCTGCTGGCATCGCTGTCCCCACTGCTGGTGGTGCTGGTGAACGAGGTGGTCAAACTGCATGAGATCAGGGTACGTGTGCGATACCAGAAGAGGCAGAAGTTACAGTTTGAGACCAAGCTGGGGATGAACTCTCCCTTCTGAGGAGCTCCGATGGGGAGGGGGCCCTGCTGTGGCCGGAGGGAAAGCGGCAGAGCACCCCAGCACTCCCCCATCCACCCTGCCTCTTTACTGGCACTGCGGGGCCCCACGTCCGGGCTCCTAGCAGGCAGGGAGGTGATGTGCCAGAGATCTCCACCAACCAGCACTTACAGACTGCCTCGGCATTCTCCCAGCCCAGTGAACACTGATAAAGCAATGTCaccagacagagacagaggcgGGTTAAAGTGCTGTTcaactttctttttaatgatatttaagttgtttttcagtttgtatttattttatttttttaactttttaatttcaagaaAAGAACCCAAAGCATTCTGaccaaaatagtttttttttgtgtttttttgtttttttataatggtTCAGAGAACACAAAAGTCAAAATCACACCCAATTAATTctacagaatgtgtttttagGGCTAGACTGTTGCTTGATAACCGAGTCTTGGACTGGGTGGCTTCAGAAGCTTTGGTTCCTCTTGCTGAGTCAGTTGAGTTTCCTCTCCTGTCTGTTTACAGCCCCATGGCAGGGGAACTATACAAAACTGGATCATGGGCACTCCTTCTTCCTGTTTCTACTTTCAAAACCAGTCTAGACAGGATTGTAGCTGAACATGATCCTGGCAAATTGATCCATGTGACTGTGCATAAACTGGTTGTGAGATTGAGATCACCCCATATTGAGGCGAGGACACCACAAAGAATACATCTAACTGTAAAGATGGATTTGTTACTTGCCAGGTGCTTATCGTAACCCACCGTGTTTCAGTCTCATTCATTGCCACGGTGTAGAAAAGGATACTGCCAATAACATGAACATGTCACAGCATTGGTCATTGAAGACTATAGCAGGCAATAGCTGAAGAGGTTTGAAGGAAAAGcagtatttttttcaatgtggCTTAACCTTGATCTCATATACTCTTTCAGTAGTGCCTGTGTAGTGAAGCATAGGCTAACCAGGATAAGGCAAAACTTAGACTAACTCAAATGGCTCTCTTAAACCTAGGCCCAATGACTTTCCTAATATGTGAATCACTACCCCTTTCATCCTTTGTATTGTAACACAATAAGTAATAGCCATCTGATGCATGTTAATGAAGAAACCTGCTTCCAATCTGTATGAAAAGGCAGGTAGAGGAACAAAGATCACAAAGCTGAAAACACAGGGCACTAAACACTGAGTATCCTGTATATAACGCCATATTTACTGTGTCCTGTTGCACTGTGGCCAGGCGGCAGTTGTACATTTAACAGAGAGGAGCCAAAAGCTTTGAAAGCCTCGATGGTCCTACAGTAAAGCAAAGTAGTCTGAGGGAACCTGTGTAAATGACAAAAAtctgaatgtttcatttttggTATCATATACCTCTCTTTTGCTTGAGATTGTACTCTGCACTGACTGCTGAAAGCTCTTCAGGTCAGTGGTCTGCAGTGTACCTGGGTCTGATTGTCTCTCGAACTTTGATATCATGCGGCCTTGTTTTTAATCGATCAGGAAATGACTTTTACTTGATGTGGACCTGACACAGTCGAGAGGCCCCTGCAGAAGGGATCCTTTAGATGATCATTTTGCACTGTACCTTCATCACAGCAGTCGGAAAGAATTTGCCAATGAGGAGGTAAAGTGCAAAGTGTCACCCAAAACACCAGTTCCTTTAATCTGTTCACTTTACTTTGCCAAGTCCGAAGTTCATCATTGCATGAGTTTCTTTCTGtggaagttatttaatttaagattgatttttttgtattatttctggtGCAACTGAGTTTGTATAGTAGTGTATTTGGAAGTCAGATCTGCCACTGCATGCACCTGTCAATTAGTACTGTATAGCGAGATGTTACAGCAATAGCTCTAAAACCCTTTATTTGTGCCGCTCCGCAATGTGCTTTTTATGGAGATGTTTTCTGAAGCTCTGTTCGATTTACCAGGGATGCCAAAATCAGCCTTCACAAATGAGAAGATGGAATAATGCAAAGATCAAACCCCTGAATCCTGATTTGAATGGGCTTTGAAAAGCTTATAAGTACAAAGAGCTTTCCTGTAGATGTTATTTCATGACTGTGTGCAATCTCAGCTACACATAGTGGTAAAAGACATACTAGAGCAAAACAAGCCAGTTAAGTGTTCAGATGCCACAGTAGTTAGTTTCATCTCTAGCTAGAGGCCTGGTTTGTACGGTTTGATAAGAGACAAAGCGCTGTTTCAATATAAAACTTCTCTTTGAACTTTGTCATGCAATGTCAGGGGCTGTACTGTGCTCACAGGACTTCAGGCTCCCTGTGTTACTTACTCATGCAAGCATAAATGAAAGGGTTTTAGAGCACTTGGCAGACCCCTCTCTTCCCATGGAGGGTGGGGTCCAGGTCAGGGCCCCTTGAATATTTCTACCTCTGGTAGCCGAGTAAAATAAGCTGTTTGCTTCAGCCAGTGGTCTGGAATGTGCAAAACTCCTCTGCCTTTTCAATACAGCGGTAGGTAAAAGCACCCGGTTCTGCCTTGCTTTTCCAATGGATCAGCCCAAGGATGGGGCAGTGTGAAGGGAACATACCGCTCACTTTGTCTGGTCATATCGCACCCATGCAAGGAGATGTGAAGGACCATGCAGCACAACTGTgtcagagagaggagagagacaatTTTATTACAGATGTGTCACTGGCTTTTCTCTGGACTGGATGTGGTCTAGCTGTGGCATAGTCCCTCGCGTTGTGCGAAATCTAAAGTTAGTCTCAAAGGTGGTTTCCCTAACCGAGATGTGCAGTGAGCTACATACCCTCTCCTGATGACAACCATGAGCACCACTGTAGCTCCACTACCACAACCTCCCCCGGCTCTTCCCCTGTAGACAATGTGAAGGACCAGCACTGCACAATGCAGTCTTTATTTACCCCCTTTGTGTCTGCTGTGTATTCCATTGGTTTGGCAAACCCTTTGCTTTTTGAATGAGCCAAAATGCCAAAATGTTTAGTCTGAATTTGAAGCTGAGACATTACTTTTTAGCAGCATTAAATTCTCAATTAGTGAACAATCTCCCGCTATCTCTCTATTTGTAATTATGGGGGAATCCACAAAAGCAACTCTACGCATATCTCGTTTGGCACCATTGGAATGGTGGGAATTACAGGTTGATAGAAACTAGAATCTCTCCCCAGATGTTGGCTGAGGTGCACAGTTGAGCTGAAAGAGATTGAGACATCTCTCTACAGATTTTGCAGTGTACTACAGCTGCTACATCATTGAATAGCAGCCCTGGACCTGCAGAGCCACGATCCAGTCCCAGTTTTTAAAGACTGGAAACAAATGTGAGTTGCATAACCCATTAGGGATGAAGGGAAATCTGGTCCTAGATCGATAAAAGGGATTTGTTCCAAATTGTATCTACACAACCTCCTTAACTGATCAGAATAAGCAATGTTTCCACgtctttaaaaaggaaaagaaacaaacgaGTTAAAGGGTGGTTTATCAAGTCTGCTgtattggggctctccaggaccatggTTGGAAACCTGTTTCATCCTATAACTTTACCTGATGCATTATGGGAAATCCTTGAACTGAGTTATCCCTGGGACTGGTACCAAGGAggttattttgtaatatttcactAGACAATGGCAATCATTGGCATTGCTGAGGGTGACTTGTGAAGTTGAATGAGATGGTGTAGGTAGGAACACCAGTACCACGTGAACTAGGCCAGGTGAATAGATGGACATGTCTAGGAGATGATGTTAAGCCTCTCTAGAGGAGGTGCAAAGGTTATAAAGCAGCATTGATGGTGATGGATGTAGGGTTGTCCTCATCTTGGACTGGCTGTCCTGAGCTCTCCCTCCGCTGAGGCTGAAGCTGCTGTGCACCCATGCGCCAGAGACGGGCCCGCACAGTGTGAATGCACAAAACCCGCAAAGGACGAGTTTGCTAATGCGACAGATTTATAAAATGGTGTATATTTtctatggaaaacaaacaaaaaaaggtttgagtgtatgtaaaattatttgatttttaagatGATTTGTCTAAAATGTCCTGTTAATAAATATggtctttttaaaaaacaaattaataaaaaaaagaaaagtaga

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013035 True 7838 mRNA 0.52 28 17657119 17688640

Neighbor

gene id symbol gene type direction distance location
AMCG00013030 NA coding upstream 18423 17601378 ~ 17638696 (+)
AMCG00013033 NA coding upstream 65418 17583125 ~ 17591701 (+)
AMCG00013031 NA coding upstream 93175 17562730 ~ 17563944 (+)
AMCG00013029 NA coding upstream 99770 17533845 ~ 17557349 (+)
AMCG00013032 NA coding upstream 139382 17509287 ~ 17517737 (+)
AMCG00013040 NA coding downstream 160116 17848756 ~ 17852896 (+)
AMCG00013041 NA coding downstream 177574 17866214 ~ 17889767 (+)
AMCG00013045 NA coding downstream 462812 18151452 ~ 18154122 (+)
AMCG00013046 NA coding downstream 566805 18255445 ~ 18258332 (+)
AMCG00013053 mfsd11,mfs11 coding downstream 577628 18266268 ~ 18280801 (+)
G41683 NA non-coding upstream 79363 17577445 ~ 17577756 (+)
G41649 NA non-coding upstream 170437 17480579 ~ 17486682 (+)
G41638 NA non-coding upstream 191060 17464901 ~ 17466059 (+)
G41611 NA non-coding upstream 510143 17146715 ~ 17146976 (+)
G41577 NA non-coding upstream 881074 16773349 ~ 16776045 (+)
G41740 NA non-coding downstream 232530 17921170 ~ 17985309 (+)
G41743 NA non-coding downstream 241295 17929935 ~ 18013678 (+)
G41744 NA non-coding downstream 315308 18003948 ~ 18018513 (+)
G41810 NA non-coding downstream 551352 18239992 ~ 18240369 (+)
G41812 NA non-coding downstream 551828 18240468 ~ 18242583 (+)
AMCG00013015 NA other upstream 927586 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 1865492 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 2026116 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 2083651 15570906 ~ 15573468 (+)
AMCG00012973 NA other upstream 2087176 15566493 ~ 15569943 (+)
AMCG00013047 NA other downstream 470202 18158842 ~ 18230238 (+)
AMCG00013068 NA other downstream 1278789 18967429 ~ 18974362 (+)
G41978 NA other downstream 1336921 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 3581035 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 3597391 21286031 ~ 21471560 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005464 tmem94 coding NC_007123.7 CM002896.2 33602429 ~ 33659328 (-)
grasscarp (Ctenopharyngodon idella) CI01000055_01754128_01776546 TMEM94 coding CI01000055 null 1754128 ~ 1776763 (+)