AMCG00013040


Basic Information

Item Value
gene id AMCG00013040
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 17848756 ~ 17852896 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013040
CAGTTCTCCCCGTGCCCCCCCTCCCAACCTAAACAGGTCTTCATGGTCACTGTAGAGAACTACTTACAGTCCAGCAAATAGCTGAGATCCAGAATAGTGGAAGTATAAAGATTCAATAGGAGGCACTTTATTTAGAAAGCAGCCTGAGGTGAACTGAAAAAACTACTTTGCTCCTCAGATCCTTCAGCAGAAAGACTGGTGAAGGCCTGCGTAGTTCAGGAAGTGGGCAGCAATTGTGGTGCAAAGATGTGGCTGTACCTCCTCCTCCCCATGTGTGAAGCAGCCAGGGGCGAGCACACTGTCAACTGTTCCTCACAGCGCTACCCCACCGTCCCCTGCTCATGGGGGTCAGACACCACCACCCTGGACCTGTCCAATAACCAGATTGAGATGATAACAACCCTGGAATTCTCAAAGGCAAGAGGGCTGAAAAGGCTCCACCTGCAGTTCAATCAGATCAGCTCTGTGGATGAAGATGCCTTCCAACACAACCCCCTGCTGGAATATCTGGATGTCTCATACAACCACCTGGGGGAGATCATCGATGCGCCCCTGAAACCCATCCCATCACTGCTCTACCTTGACATCACCGGCAATGTGTACGACCGCGTGATTTTGGGCCCGGGATTCCGAGGTCTGGAGAAGCTGCAGATCCTCAGGCTTGGGAACCCTCAGGTGGTGTCTCTGAAGGCGAAAGACATGCAGCTGCTCAGGGGCCTCCCATTGAAGGAGCTGCACCTGATCACAGGAGACCTAGGTGAGTACGACGGCGCTCTGAGAGGCCTGAAGAATCTCAACATCCTGACCTTGGAGATTAACGTAAGGATTCATGTACAGACCTTCAAGGTGTTAACGGACGACATCATTAACTCCACCACAACCCTGAAACTGAAGAACCTGGATCTGACGCAGACGCCAAACGTCCCCTTATTCCACTCTGTGGAAAACTCCCCCATAAAATCTGTAACTGTAGAGAACATTTCTATTACCAAGGAGTACTGCACCGCCATGTTCACCAGTTTTCTCTTGTCCAGCATCGCAGAGATTACGATCGACAAAGTTGTTTGCATGGGAACCTGCATCTCCCAGGTCCCCCCCTTCGAGCACAGCACTCTGACCAGCCTTTCTGTATGGAACCTGGACAACCCCTCCATTTACATATTCAGCCCAGGAGGATCTGTGAAAAAGTTCTTCCAGCCCTTTCTCCACCTGTCCCTGGTGAACGCTGTCGTCTTCTTTATGCCCTGCTTGCTGTCACAGGCCATGATCAATCTGGAAACGCTAGATTTCTCCTCTAACACCCTGGACTGCCTCTCTATGTTCCCAGACTGTAACAAGCCCTTACCTAACCTGCGTTCCATGGTGGTCGACAAAAACTTGTTCAAATCGATGCAAATGCTCTCACAGGTGACGAACCACATGAAGCACCTTGTGAACCTATCAGCAAATCACAACACATTCTACCGGGAGATTGGAGTGTGCAACTGGACCCAGAGCCTCAGGAGAATGTCCCTGAGGGGGAATAAGTTTTCCAGCAAAGTTTTACACTGTCTGCCCAGCTCATTGGAAATGCTGGACCTGAGTGTCAATCACATCACTGTTTTGCTCCACCTTGAGAAAATGGTGAATCTCTCCCAGCTATATCTTTCAGACAACCGCATCTTTTCTCTTGCAACTCTTCCTAGACAGCTATCCCTTGCAGTTCTCTATCTGGATGGGAATGATTTACCTGGAGTGAACAGTAGTCTGCTGTCAGCACTTAGGGGGACTGAGTTGAAATTGAGCAACAACCCCTTTGATTGTGGCTGCGACATCTTGACTTTGAAAGGATTCTGTCAAAGTGCCAAAGTGGTGGACTGGGACAAGGACTATCGGTGTGAGAAGCCAGCAAGTCTAAATGGTACAGAACTGCAGTTCCTAACATTACCCCATTGTAGGACAGGACTAATTGTGGGCAGTGTCATTTTGTGCTTGATCCTTGtacctgctgtttttttaattgtcaaaaAATTAAAGAACCGGTGCCATGCTTATAATGAGATCAATTAGACCAATGTTGCCCATGTTTTCTCAACCAGCTGGTACTGAAGAATTGCTAGAAGCCTGGTTGAACcatgattttatttcctttaatacACTTTTAGTACCCGGCATTCATAGATTGCCATAGTCTGTGCTTGCCTTGTTCCATGTTCCAAGTTAATTTGGAAACCAATTTATTTCAACAGATCTTTGCTTTCATAGTTTGCTGCGGGGTAACAGAGAAGTTTTCCTGAACAGTTCAGGCCAGGGGTGTGAGAAATTATCTGGCTGTCTCTTCTGAGCTTCCCTGTTTCCTTTGCCCAGCAGTCCTGCATGGCATTTACATACCAGCtattaagaaaattaatttcatgggcacatatgaatatgaatacaatgTCAAGAAAAATgccacatgtttaaaaaataatatccttTTGAGTGTTTCTAGACTGCAAATTTTCTCATcattttctgagattttctAACAAATGCTTTGGAAGTGGGCATGAGTTGTGCGTTCTAACAGCTTTTACTTTCGccaaaaaaacctaaaaacaaaaaccccagCCAGTGGAATACAGCATAGTCTATATCATTGAGAAGATAAACATTGCAAACTATCATTGCTTTTAACTATTTTGTGTCTTGGGCTGCTTGATGTAGGCTtggagtgaaaataaataaatatgctttgAGGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013040 True 2727 mRNA 0.46 2 17848756 17852896

Neighbor

gene id symbol gene type direction distance location
AMCG00013035 NA coding upstream 160116 17657119 ~ 17688640 (+)
AMCG00013030 NA coding upstream 210060 17601378 ~ 17638696 (+)
AMCG00013033 NA coding upstream 257055 17583125 ~ 17591701 (+)
AMCG00013031 NA coding upstream 284812 17562730 ~ 17563944 (+)
AMCG00013029 NA coding upstream 291407 17533845 ~ 17557349 (+)
AMCG00013041 NA coding downstream 13318 17866214 ~ 17889767 (+)
AMCG00013045 NA coding downstream 298556 18151452 ~ 18154122 (+)
AMCG00013046 NA coding downstream 402549 18255445 ~ 18258332 (+)
AMCG00013053 mfsd11,mfs11 coding downstream 413372 18266268 ~ 18280801 (+)
AMCG00013052 NA coding downstream 479829 18332725 ~ 18351553 (+)
G41683 NA non-coding upstream 271000 17577445 ~ 17577756 (+)
G41649 NA non-coding upstream 362074 17480579 ~ 17486682 (+)
G41638 NA non-coding upstream 382697 17464901 ~ 17466059 (+)
G41611 NA non-coding upstream 701780 17146715 ~ 17146976 (+)
G41577 NA non-coding upstream 1072711 16773349 ~ 16776045 (+)
G41740 NA non-coding downstream 68274 17921170 ~ 17985309 (+)
G41743 NA non-coding downstream 77039 17929935 ~ 18013678 (+)
G41744 NA non-coding downstream 151052 18003948 ~ 18018513 (+)
G41810 NA non-coding downstream 387096 18239992 ~ 18240369 (+)
G41812 NA non-coding downstream 387572 18240468 ~ 18242583 (+)
AMCG00013015 NA other upstream 1119223 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 2057129 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 2217753 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 2275288 15570906 ~ 15573468 (+)
AMCG00012973 NA other upstream 2278813 15566493 ~ 15569943 (+)
AMCG00013047 NA other downstream 305946 18158842 ~ 18230238 (+)
AMCG00013068 NA other downstream 1114533 18967429 ~ 18974362 (+)
G41978 NA other downstream 1172665 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 3416779 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 3433135 21286031 ~ 21471560 (+)

Expression


Co-expression Network