Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013045 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 18151452 ~ 18154122 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030145 | manganese ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013045 | True | 486 | mRNA | 0.46 | 4 | 18151452 | 18154122 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013041 | NA | coding | upstream | 261685 | 17866214 ~ 17889767 (+) |
| AMCG00013040 | NA | coding | upstream | 298556 | 17848756 ~ 17852896 (+) |
| AMCG00013035 | NA | coding | upstream | 462812 | 17657119 ~ 17688640 (+) |
| AMCG00013030 | NA | coding | upstream | 512756 | 17601378 ~ 17638696 (+) |
| AMCG00013033 | NA | coding | upstream | 559751 | 17583125 ~ 17591701 (+) |
| AMCG00013046 | NA | coding | downstream | 101323 | 18255445 ~ 18258332 (+) |
| AMCG00013053 | mfsd11,mfs11 | coding | downstream | 112146 | 18266268 ~ 18280801 (+) |
| AMCG00013052 | NA | coding | downstream | 178603 | 18332725 ~ 18351553 (+) |
| AMCG00013054 | NA | coding | downstream | 205433 | 18359555 ~ 18362887 (+) |
| AMCG00013057 | NA | coding | downstream | 234689 | 18388811 ~ 18396122 (+) |
| G41744 | NA | non-coding | upstream | 132939 | 18003948 ~ 18018513 (+) |
| G41743 | NA | non-coding | upstream | 137774 | 17929935 ~ 18013678 (+) |
| G41740 | NA | non-coding | upstream | 166143 | 17921170 ~ 17985309 (+) |
| G41683 | NA | non-coding | upstream | 573696 | 17577445 ~ 17577756 (+) |
| G41649 | NA | non-coding | upstream | 664770 | 17480579 ~ 17486682 (+) |
| G41810 | NA | non-coding | downstream | 85870 | 18239992 ~ 18240369 (+) |
| G41812 | NA | non-coding | downstream | 86346 | 18240468 ~ 18242583 (+) |
| G41814 | NA | non-coding | downstream | 88661 | 18242783 ~ 18244143 (+) |
| G41818 | srsf2,srsf2b,LOC105012916,LOC108430244,LOC106612293 | non-coding | downstream | 107841 | 18261963 ~ 18265695 (+) |
| G41821 | NA | non-coding | downstream | 129506 | 18283628 ~ 18284855 (+) |
| AMCG00013015 | NA | other | upstream | 1421919 | 16719355 ~ 16729533 (+) |
| AMCG00012987 | NA | other | upstream | 2359825 | 15782364 ~ 15791627 (+) |
| AMCG00012982 | ssbp1,LOC106576077,LOC106609216 | other | upstream | 2520449 | 15620735 ~ 15631003 (+) |
| AMCG00012978 | NA | other | upstream | 2577984 | 15570906 ~ 15573468 (+) |
| AMCG00012973 | NA | other | upstream | 2581509 | 15566493 ~ 15569943 (+) |
| AMCG00013047 | NA | other | downstream | 4720 | 18158842 ~ 18230238 (+) |
| AMCG00013068 | NA | other | downstream | 813307 | 18967429 ~ 18974362 (+) |
| G41978 | NA | other | downstream | 871439 | 19025561 ~ 19029278 (+) |
| G42326 | LOC105030495,LOC106938339,LOC103143718,LOC103461378 | other | downstream | 3115553 | 21269675 ~ 21278728 (+) |
| AMCG00013118 | LOC106594791 | other | downstream | 3131909 | 21286031 ~ 21471560 (+) |
