AMCG00013055



Basic Information


Item Value
gene id AMCG00013055
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 18292170 ~ 18293312 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00013055
ATGCTGGATCAGACCCTGTATGACTTCTTCAGCTTCGGGCCCCTGCCCCTCAAGCACATCAGGCCAATCCTGCAGCAGGTCGCCACTGCCCTGATGAAACTGGAGAGTTTGGGGATGATCCACACCGACCTCAAGCCTGACAACATTATGCTGGTGGACTACGCCAGTAAGCCCCTCCGAGTCAAACTGATCGACTTCGGCCTGGCCATCCATGTCTCGGAGGCAGTGCGCTCTGCCTGCATGCAGGCCACATATTTCAGGGCTCCAGAGATCATGCTGGGCCTGCCCTACAATCAAGCCATCGATATGTGTTCGCTGGGCTGCATCATTGCAGAGCTGTTTCTGGGGTGTCCTCTGTACCCCGGGGCATGTACTATCAAATCCGGTACATTGTTGAGAATGCAGAGTTTGCCTATTGAGAACCTGCTAAGTGCCGGGACGAAGACAGGAGAGTTCTTTAAGAGAGACTCTGCCGACTCTCTGTGGAGACTGAAGATGCCAGAGGAGCATGAGGGAGAGACGGGGATCCAGTCAAAGGAGCAGCGTCTGTACATGTCCAGTGGTTTTGATGACATGGCACTGCTCCATATGCCAATGGATCTGGAAGGGAATGACTTGCTGGCAGAATTGACAGACCAGCTGCAGTTCATCGACCTGCTGAAGAGGATGCTGAAGATGAACCCAGATGACAGGATTACCTCCATCCAAGTCCAGAACCATCCATTTGTCACTTTGACACATCTATTTGAGTTCCTCCCCAGCACATATGTCATGTCTTGTGCCCAGGACATGGAGGTCTGCTATAGTCGAGTCAATACCAACACAGCCCCCAGCACGACCTCCAACAGCCAGCTCAACACTGCCCCCAACACGACGTCCAACAGCCAGCTCAACGCTGCACCCAACCAGGCACAGCAACTCGTGGTTGCAGAGGGGAACGAAGGGCACCGCGGGCAACCAGATATCATCACCCCCACCATCGTACAGGCACCGGCAGCAGACGCCCAACTCTACAACCCCCCCAGGCCGGGCACTATGGGCTGGGCTCGGCTCACCACGTGGGCCATGAGAAACATCCCGCCTGCCCCGGGCACTATGGGTAGGGCTCGGCCCACCACGCGGGCCACGAGAAAGTGCATTTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00013055 True 1143 mRNA 0.56 1 18292170 18293312

Neighbor


gene id symbol gene type direction distance location
AMCG00013050 srsf2,srsf2b,LOC105012916,LOC108430244 coding downstream 26672 18265139 ~ 18265498 (-)
AMCG00013048 jmjd6,LOC107654591 coding downstream 36821 18244195 ~ 18255349 (-)
AMCG00013049 NA coding downstream 53015 18194012 ~ 18239155 (-)
AMCG00013044 NA coding downstream 142992 18139575 ~ 18149178 (-)
AMCG00013043 NA coding downstream 183774 18089693 ~ 18108396 (-)
AMCG00013063 NA coding upstream 265636 18558948 ~ 18564943 (-)
AMCG00013065 NA coding upstream 479313 18772625 ~ 18788291 (-)
AMCG00013066 grin2c,LOC105022923 coding upstream 511700 18805012 ~ 18820165 (-)
AMCG00013067 NA coding upstream 625252 18918564 ~ 18926388 (-)
AMCG00013072 NA coding upstream 670547 18963859 ~ 18964335 (-)
G41850 NA non-coding downstream 6174 18285551 ~ 18285996 (-)
G41849 NA non-coding downstream 7639 18283628 ~ 18284531 (-)
G41848 NA non-coding downstream 9540 18279560 ~ 18282630 (-)
G41839 NA non-coding downstream 32764 18259127 ~ 18259406 (-)
G41813 NA non-coding downstream 49635 18240468 ~ 18242535 (-)
G41851 NA non-coding upstream 2333 18295645 ~ 18295946 (-)
G41858 NA non-coding upstream 38498 18331810 ~ 18386206 (-)
G41875 NA non-coding upstream 135742 18429054 ~ 18433717 (-)
G41922 NA non-coding upstream 366942 18660254 ~ 18660522 (-)
G41925 NA non-coding upstream 403508 18696820 ~ 18697607 (-)
AMCG00013051 NA other downstream 27327 18258089 ~ 18264843 (-)
G41836 NA other downstream 48077 18242750 ~ 18244093 (-)
G41807 NA other downstream 100648 18176061 ~ 18191522 (-)
AMCG00013042 NA other downstream 245456 17929898 ~ 18046714 (-)
AMCG00013038 NA other downstream 382153 17880225 ~ 17910017 (-)
AMCG00013071 rab37,LOC105012908,LOC106606976,LOC105901728,LOC108439461,LOC107746753,LOC107715539,LOC103393210,LOC108242943,LOC101475770,LOC108278300 other upstream 683748 18977060 ~ 19022778 (-)
AMCG00013070 NA other upstream 774933 19068245 ~ 19071418 (-)
G42076 NA other upstream 1687024 19980336 ~ 19982880 (-)
AMCG00013090 NA other upstream 2237882 20531194 ~ 20545811 (-)
G42366 myhz2,LOC106598369,LOC104955241 other upstream 2958795 21252107 ~ 21301421 (-)

Expression



Co-expression Network