Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013057 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 18388811 ~ 18396122 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013057 | True | 225 | mRNA | 0.50 | 2 | 18388811 | 18396122 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013054 | NA | coding | upstream | 25924 | 18359555 ~ 18362887 (+) |
| AMCG00013052 | NA | coding | upstream | 37258 | 18332725 ~ 18351553 (+) |
| AMCG00013053 | mfsd11,mfs11 | coding | upstream | 108010 | 18266268 ~ 18280801 (+) |
| AMCG00013046 | NA | coding | upstream | 130479 | 18255445 ~ 18258332 (+) |
| AMCG00013045 | NA | coding | upstream | 234689 | 18151452 ~ 18154122 (+) |
| AMCG00013056 | NA | coding | downstream | 10589 | 18406711 ~ 18433678 (+) |
| AMCG00013061 | NA | coding | downstream | 44473 | 18440595 ~ 18444746 (+) |
| AMCG00013059 | NA | coding | downstream | 66469 | 18462591 ~ 18471589 (+) |
| AMCG00013060 | NA | coding | downstream | 82575 | 18478697 ~ 18504972 (+) |
| AMCG00013062 | NA | coding | downstream | 116450 | 18512572 ~ 18513860 (+) |
| G41823 | LOC107575789,LOC100846954 | non-coding | upstream | 89897 | 18298625 ~ 18298914 (+) |
| G41822 | NA | non-coding | upstream | 92865 | 18295645 ~ 18295946 (+) |
| G41821 | NA | non-coding | upstream | 103956 | 18283628 ~ 18284855 (+) |
| G41818 | srsf2,srsf2b,LOC105012916,LOC108430244,LOC106612293 | non-coding | upstream | 123116 | 18261963 ~ 18265695 (+) |
| G41814 | NA | non-coding | upstream | 144668 | 18242783 ~ 18244143 (+) |
| G41908 | NA | non-coding | downstream | 264132 | 18660254 ~ 18660522 (+) |
| G41924 | NA | non-coding | downstream | 300698 | 18696820 ~ 18697632 (+) |
| G41990 | NA | non-coding | downstream | 670851 | 19066973 ~ 19068210 (+) |
| G42054 | NA | non-coding | downstream | 1190406 | 19586528 ~ 19586793 (+) |
| G42077 | NA | non-coding | downstream | 1590056 | 19986178 ~ 19987860 (+) |
| AMCG00013047 | NA | other | upstream | 158573 | 18158842 ~ 18230238 (+) |
| AMCG00013015 | NA | other | upstream | 1659278 | 16719355 ~ 16729533 (+) |
| AMCG00012987 | NA | other | upstream | 2597184 | 15782364 ~ 15791627 (+) |
| AMCG00012982 | ssbp1,LOC106576077,LOC106609216 | other | upstream | 2757808 | 15620735 ~ 15631003 (+) |
| AMCG00012978 | NA | other | upstream | 2815343 | 15570906 ~ 15573468 (+) |
| AMCG00013068 | NA | other | downstream | 571307 | 18967429 ~ 18974362 (+) |
| G41978 | NA | other | downstream | 629439 | 19025561 ~ 19029278 (+) |
| G42326 | LOC105030495,LOC106938339,LOC103143718,LOC103461378 | other | downstream | 2873553 | 21269675 ~ 21278728 (+) |
| AMCG00013118 | LOC106594791 | other | downstream | 2889909 | 21286031 ~ 21471560 (+) |
| AMCG00013126 | myhb,LOC108443910 | other | downstream | 2974721 | 21370843 ~ 21421316 (+) |
