AMCG00013063


Basic Information

Item Value
gene id AMCG00013063
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 18558948 ~ 18564943 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013063
ATGGTGTGCCTTTTCAAAAGCAGGCAGGCGTTTTCGATCCGAGAGCATCGcAGCTCCGTCATCATGAGAATAAACGAAGACACGCTGTTGGAGGGAGAGCATGTGGTGCTGGTGCCGTACAACCCGGATCATGTGCCCAGGTATGGATGGGTACAGAGAAGACACCTCTGCGGGGAGTGCACCTTCATCATCCTGGATAAGCAGCAATGGGCCGACCCCACGGTGCGAGAGGAGGACTGCATGGTGGGAGATGTCAACATCTTTCTCACTGACCCCGAGGACCCTTCCCTTGGAGAGCTGGAAATCATGATAGCAGATCCCAGCTACAGAGGCAGAGGACTGGGCAAGGAGGTCACTCGCATGATGATATGCTATGGGGTGACCAAACTTGGCATTCAAAAGTTCGAAGCCAAAATTGGAATGGACAACAAAGTCAGCATCGTCCTGTTCAAGAAATTTCACTTCCAGGAGGTATCCTCAAGCGAGGTGTTCCGGGAGGTAACACTGGAGCTGACCGTGGACGAAGCGCAGAAGAAGTGGCTCCTGGGTAACATGGACTTCATGCAGGAGAAACAGTACTCCAAAACGAGGGCTAGACGCATGGGGGCAGAGTCCTCAGTAGAATGAGGAAAGGCCACCCCCTAACCCTATCCATCTCCCTGACAAGctccccacctccccctccccctcccataACAGCCCTCATTTCAAAGCTGGAGACCTGGTTTTGAGCCATTGATTTCCGTTCGGGTGCTGCTGGATCAAAGCTTCCAACGGCATGTGGAACCAAAGCCAGCCACAACCGATGAAACGAAAACCGCCAACTCACTCCCACGACCCATTTCCCCGTACACCCTTTTGCAGAGCAGAAGACAAGGCAATGGTTGAGGCAGTGAGTGATCCGTTGACTTCTGACCGGGAAAGCCACTGCTGGGCCTCTTAATGCCTGGATCACTTCTGTCCCCATTACGATTGGAGGAGACAGAATGGTTACTGGTAAACAGACCCAGGCATAAGCCCGCTCCTGGAGAATCCCAGTCACCTTCATTGACTGCCTGAATATGCGACTCCTGTTGTGTTCTGCTCTCTAGCATTTTGAAGAAATCTATGGAGCCTGCAAGACTGTGGTTCTCTAGGAACAGCCTCAGACCTGGGATCAAGTCTAACTGCAATTAGTAATTCATAGCAATGACTGATTAGGGTTCAGTCACAGCCCAATGACAACCTGGTCATGCCtaagatgatttttttttttaaattgacatgaGCCTTTACTGTTTTGTGACAATAACACTATGCAGCATACTGCTTTgcactcatgactggaaggtagTGGGTTCAAATcttgggtggggcagtgctgttgtacccttgagcaagctacttcacttagattgctccagtacaatacccagctgtataaatgggtacaagttgccctggataagagtgtctgctaaatggtGGCTTGTATCACAGCTGATGGATCTGTAAAGTTAAGTGCAATATCCCAGGGTTACAAAAAATTCTGGAATTTTAGCAAACTAAGGCCACAGATTAGATAATAGTCTCCTCTGCCAATCAAAGTTTTTGATCcaaacagcatttgtttttagatttaatcAAATCCTCCCTTTTTTGTGCAATGTAACACAGTGTAGATCAAGTTAATAACAGATGCTGGTTGGATGGAAATACAGCCCCTGGTGCTGGGAAGGGTGTTAAATCTGGGGAACACGGTCACAGCGTTAGGCTACAGAAGACTGGGAGAAACAGTGCAGTAAGCGTGTTAAGTTTTGTCTATGTggtaccatttaaaaaaaaaaaaaaaaaagttgctgcTTTTTGTAAATTGTTGTCCAAATGCTTATTACCAATCATGATGTACTGCAAGAGCACAACTACATGAAAACGCATAAACCCTTTTCCCTGTGCTACTTGTTGTCAGTCAAGTGATTTCAACATGCAAAAGGAATTTGCAGTTTAACCATGCTCAGCATCCTAGATGGTTAGTGACCAAAATTAAACCAAGCATTTTAATCtttagaattttaaaatgtacctttCAATCACTGCCCACcatcaaaaatattttcaaactcATTTTGTTGGATCTAAGAGTGGTAAAATTAAAGATACCATGAGCTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013063 True 2150 mRNA 0.46 6 18558948 18564943

Neighbor

gene id symbol gene type direction distance location
AMCG00013055 NA coding downstream 265636 18292170 ~ 18293312 (-)
AMCG00013050 srsf2,srsf2b,LOC105012916,LOC108430244 coding downstream 293450 18265139 ~ 18265498 (-)
AMCG00013048 jmjd6,LOC107654591 coding downstream 303599 18244195 ~ 18255349 (-)
AMCG00013049 NA coding downstream 319793 18194012 ~ 18239155 (-)
AMCG00013044 NA coding downstream 409770 18139575 ~ 18149178 (-)
AMCG00013065 NA coding upstream 207682 18772625 ~ 18788291 (-)
AMCG00013066 grin2c,LOC105022923 coding upstream 240069 18805012 ~ 18820165 (-)
AMCG00013067 NA coding upstream 353621 18918564 ~ 18926388 (-)
AMCG00013072 NA coding upstream 398916 18963859 ~ 18964335 (-)
AMCG00013069 NA coding upstream 460629 19025572 ~ 19046046 (-)
G41875 NA non-coding downstream 125231 18429054 ~ 18433717 (-)
G41858 NA non-coding downstream 172742 18331810 ~ 18386206 (-)
G41851 NA non-coding downstream 263002 18295645 ~ 18295946 (-)
G41850 NA non-coding downstream 272952 18285551 ~ 18285996 (-)
G41849 NA non-coding downstream 274417 18283628 ~ 18284531 (-)
G41922 NA non-coding upstream 95311 18660254 ~ 18660522 (-)
G41925 NA non-coding upstream 131877 18696820 ~ 18697607 (-)
G42056 NA non-coding upstream 1119493 19684436 ~ 19684658 (-)
G42058 NA non-coding upstream 1211581 19776524 ~ 19776729 (-)
G42078 NA non-coding upstream 1421300 19986243 ~ 19987735 (-)
AMCG00013051 NA other downstream 294105 18258089 ~ 18264843 (-)
G41836 NA other downstream 314855 18242750 ~ 18244093 (-)
G41807 NA other downstream 367426 18176061 ~ 18191522 (-)
AMCG00013042 NA other downstream 512234 17929898 ~ 18046714 (-)
AMCG00013038 NA other downstream 648931 17880225 ~ 17910017 (-)
AMCG00013071 rab37,LOC105012908,LOC106606976,LOC105901728,LOC108439461,LOC107746753,LOC107715539,LOC103393210,LOC108242943,LOC101475770,LOC108278300 other upstream 412117 18977060 ~ 19022778 (-)
AMCG00013070 NA other upstream 503302 19068245 ~ 19071418 (-)
G42076 NA other upstream 1415393 19980336 ~ 19982880 (-)
AMCG00013090 NA other upstream 1966251 20531194 ~ 20545811 (-)
G42366 myhz2,LOC106598369,LOC104955241 other upstream 2687164 21252107 ~ 21301421 (-)

Expression


Co-expression Network