Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013067 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 18918564 ~ 18926388 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006612 | protein targeting to membrane | biological_process |
| GO:0043113 | receptor clustering | biological_process |
| GO:0055078 | sodium ion homeostasis | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| id | description |
|---|---|
| K13365 | SLC9A3R1, NHERF1; sodium/hydrogen exchange regulatory cofactor NHE-RF1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013067 | True | 321 | mRNA | 0.55 | 2 | 18918564 | 18926388 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013066 | grin2c,LOC105022923 | coding | downstream | 98399 | 18805012 ~ 18820165 (-) |
| AMCG00013065 | NA | coding | downstream | 130273 | 18772625 ~ 18788291 (-) |
| AMCG00013063 | NA | coding | downstream | 353621 | 18558948 ~ 18564943 (-) |
| AMCG00013055 | NA | coding | downstream | 625252 | 18292170 ~ 18293312 (-) |
| AMCG00013050 | srsf2,srsf2b,LOC105012916,LOC108430244 | coding | downstream | 653066 | 18265139 ~ 18265498 (-) |
| AMCG00013072 | NA | coding | upstream | 37471 | 18963859 ~ 18964335 (-) |
| AMCG00013069 | NA | coding | upstream | 99184 | 19025572 ~ 19046046 (-) |
| AMCG00013075 | LOC106589445 | coding | upstream | 154348 | 19080736 ~ 19209004 (-) |
| AMCG00013078 | NA | coding | upstream | 285455 | 19211843 ~ 19390121 (-) |
| AMCG00013077 | NA | coding | upstream | 1037142 | 19963530 ~ 19978155 (-) |
| G41925 | NA | non-coding | downstream | 220957 | 18696820 ~ 18697607 (-) |
| G41922 | NA | non-coding | downstream | 258042 | 18660254 ~ 18660522 (-) |
| G41875 | NA | non-coding | downstream | 484847 | 18429054 ~ 18433717 (-) |
| G41858 | NA | non-coding | downstream | 532358 | 18331810 ~ 18386206 (-) |
| G41851 | NA | non-coding | downstream | 622618 | 18295645 ~ 18295946 (-) |
| G42056 | NA | non-coding | upstream | 758048 | 19684436 ~ 19684658 (-) |
| G42058 | NA | non-coding | upstream | 850136 | 19776524 ~ 19776729 (-) |
| G42078 | NA | non-coding | upstream | 1059855 | 19986243 ~ 19987735 (-) |
| G42136 | NA | non-coding | upstream | 1475320 | 20401708 ~ 20405085 (-) |
| G42242 | NA | non-coding | upstream | 1739957 | 20666345 ~ 20674228 (-) |
| AMCG00013051 | NA | other | downstream | 653721 | 18258089 ~ 18264843 (-) |
| G41836 | NA | other | downstream | 674471 | 18242750 ~ 18244093 (-) |
| G41807 | NA | other | downstream | 727042 | 18176061 ~ 18191522 (-) |
| AMCG00013042 | NA | other | downstream | 871850 | 17929898 ~ 18046714 (-) |
| AMCG00013038 | NA | other | downstream | 1008547 | 17880225 ~ 17910017 (-) |
| AMCG00013071 | rab37,LOC105012908,LOC106606976,LOC105901728,LOC108439461,LOC107746753,LOC107715539,LOC103393210,LOC108242943,LOC101475770,LOC108278300 | other | upstream | 50672 | 18977060 ~ 19022778 (-) |
| AMCG00013070 | NA | other | upstream | 141857 | 19068245 ~ 19071418 (-) |
| G42076 | NA | other | upstream | 1053948 | 19980336 ~ 19982880 (-) |
| AMCG00013090 | NA | other | upstream | 1604806 | 20531194 ~ 20545811 (-) |
| G42366 | myhz2,LOC106598369,LOC104955241 | other | upstream | 2325719 | 21252107 ~ 21301421 (-) |
