AMCG00013092


Basic Information

Item Value
gene id AMCG00013092
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 20558228 ~ 20565344 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013092
attccctgacgtGCTGCGTCCAAGCTAGCTTGATATTAAAgatctatttgctttatctcaaaaacttttccagttatttccgaCATGGGTTCAACAGAGCGTTTCTTCTTTTTGCTGATATGGAGAAGAAGCTGTACACTTTCAGGACCACATTCTCCACGTCTACACTCAGGTTGTCAAGAGCATGCTTGAGGGTATTATGCACAATGTGTGCATGGCAGTTACCCTGAAGTAagttgatttgttgttttctcaacATTGTGAAGAATTGTGGACCCCAAAGTTCACATTTGCATTGTTAGCACTGAAAGCTGAAACTTGCTCTATTTTCAGGCCAAGTGTTTCAAACGAGTGCAGTAGGCACCCCACGATCCCCTCTGCTGATTCATAGGGATTTTCGACAAAGTCAATCATTTTATTCACCACACCCCATTCTGGTGTGAAGAACTGGACCGCCACGAGGAACATCTTTCTGTTGCCTTTGTTGGAGGCATCCGTCTGTATGGAGAAAGGTAGAGGTGTTTCATCTTTCTTCAACATCCCGACCACATCTTCCATGGCCGTTGGTGCTAGCACATACTTCACCAAGGACTCCGCCTTTGTTCTCCCACAAGAGATTTTTTTGGCAACCTTTGAGTCTGGCAACATTTTCTGGCATACAGCCAGGAGCCCAACCGAGTGAACGAGCTCAAGCCATTTGATTGTGCTGTAAAAAATGAGAACAGGGGTCAACAGCCAGGCTTAAAGGATAAAGTCCTTTTTGCTGCTCTCTCTGAGGAAGTCTGTGCAGCTCGTATTAACAGCCTGAAGCTGGCGAAGGTGCAGCTGTTGGTAGAAACTTGCAACATGACAGAAAAAGATCTTTATACGGAGTACAAAGGGGTGTATGTGCCCAAACATCTGCATCCTCCACAGAGCCTGAAGTATGCCGAAGAGTTTGAATTTCGCCCCGATGATATACTTATCGTGACGTACCCGAAATCTGGAGATCTCACTCCAGTTCTCACAGTGCCCAACTGGGACAGAGTGCCCTGGCTGGAGGAGCACCGTGCCATAGTGTTGAACCTGGAGGACAGACCTGCCCCCCGCATCTTTGCCACTCACTTCCATTATCACATGATGCAGCAATCCTACTTTAAGAACAAACCAAAGGTTATTTATGTCATGCGGAATCCCAGGGATGTCTTCGTTTCTTCCTATCACTATTACGGAATGGCATCTTATCTGGTGAAACCTGGGACACTGGATGAATTCCTCATGAAGTTCATAAATGGAAAAGTGATGTTTGGATCATGGTTCGATCATGTGAAGGGATGGCTGAATGCAAAAAATCAAGATCTCATAATGTACATTACATATGAGGAAATGATTTGGgatttaaaggaaTCTGTTTCCAAATTAGCCAATTTCCTTGGGAAATCCCTGAGTCCAGAGTTGATTGGAAAAATAGCTGAGCACTGCACATTTAAGAACATGAAGCAGAACAACATGTCAAATTACTCCCTGGTGCCCCAGGAGTTCATGGATCAAAATAAGTCTGCATTTCTCAGAAAAGGAATTTGTGGCGACTGGAAGAACCACTTCACAGTAGCCCAGGCAGAATGGCTTGATTCAGTTTACAAAGAAGAGATGAAGGAtgtgaaattcaaattcatgtGGGATGAACAATGATTGACAGCtcttaaaatacaaacagaatgATCAGAAGTGtcttaatattataaaacattttttaactgaaatgataatatgtttattttcataacatttgcattttaacattcattGTCATAGTAATGTCTCAGTATTGTTATTCacttacattaaataaagttaactgatactatttgttttttcagtttaaattaattatggaATCAGAATTATTGTAACcattctaaaaataattaaataatggaacGTGAATAGTTCCTTAGCGTTACACTAAAGACTGTTATATGCTCAtatttagtatgtttttgtaattattcattttgttttaaaaattgcCAAGGGAAATCCCAGAAGTATTTCTTCTGCCAAGATGTTTGTGATTACTTCTGTAAAGTGAACACTTTGAATCCATCCAGCTTGttaagttttgtattttttgttcatcAGCATTATGCCtagatgtgtttattaataaaagctTTCTGTCTGAGGCAGGTCAACAAGAACTAATGAGGCATGTGTATTTCAGGCATGAAGGATCTTGTAGATCAGTGTTTGCCATCTAATTGCCacctttgaaaataatacatatttttgtaaccCCCAACTTTGTATAAAAGGGtttcattaaacatatttaacttGTGTAAGTGGTGTCAAGGCAAGGAGGTGACCATCTGTCATTATTCATCATTAagctgtctgtctatctatctatctatctatct

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008146 sulfotransferase activity molecular_function
GO:0016783 sulfurtransferase activity molecular_function

KEGG:

id description
K01015 SULT2B; alcohol sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013092 True 2402 mRNA 0.40 7 20558228 20565344

Neighbor

gene id symbol gene type direction distance location
AMCG00013089 NA coding upstream 23905 20523791 ~ 20534323 (+)
AMCG00013086 LOC106606937,LOC105022949,LOC106601506 coding upstream 44702 20512716 ~ 20513526 (+)
AMCG00013087 NA coding upstream 55887 20485023 ~ 20502341 (+)
AMCG00013088 luc7l3 coding upstream 155127 20398609 ~ 20403101 (+)
AMCG00013082 LOC104949960,LOC107101812 coding upstream 299594 20257660 ~ 20258634 (+)
AMCG00013093 NA coding downstream 1803 20567147 ~ 20625298 (+)
AMCG00013091 bsk146,LOC103373441,LOC104933992 coding downstream 76348 20641692 ~ 20650263 (+)
AMCG00013099 NA coding downstream 195522 20760866 ~ 20768593 (+)
AMCG00013098 NA coding downstream 207884 20773228 ~ 20775301 (+)
AMCG00013101 NA coding downstream 252177 20817521 ~ 20830999 (+)
G42172 NA non-coding upstream 6411 20551260 ~ 20551817 (+)
G42127 NA non-coding upstream 165619 20387684 ~ 20392609 (+)
G42077 NA non-coding upstream 570368 19986178 ~ 19987860 (+)
G42054 NA non-coding upstream 971435 19586528 ~ 19586793 (+)
G41990 NA non-coding upstream 1490018 19066973 ~ 19068210 (+)
G42177 NA non-coding downstream 61750 20627094 ~ 20627334 (+)
G42269 NA non-coding downstream 274245 20839589 ~ 20840560 (+)
G42277 NA non-coding downstream 324331 20889675 ~ 20890332 (+)
G42330 LOC106589491,LOC105023009,LOC103368359,LOC100710639,LOC102784652,LOC102295130 non-coding downstream 691241 21256585 ~ 21304213 (+)
G42331 LOC100710639,LOC102784652,LOC102295130,LOC102192639,LOC101477534,LOC108412652 non-coding downstream 798760 21364104 ~ 21411989 (+)
G41978 NA other upstream 1528950 19025561 ~ 19029278 (+)
AMCG00013068 NA other upstream 1583866 18967429 ~ 18974362 (+)
AMCG00013047 NA other upstream 2327990 18158842 ~ 18230238 (+)
AMCG00013015 NA other upstream 3828695 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 4766601 15782364 ~ 15791627 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 704331 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 720687 21286031 ~ 21471560 (+)
AMCG00013126 myhb,LOC108443910 other downstream 805499 21370843 ~ 21421316 (+)
G42344 LOC108412647 other downstream 861316 21426660 ~ 21486808 (+)
G42453 NA other downstream 1677085 22242429 ~ 22245790 (+)

Expression


Co-expression Network