AMCG00013096 (mprip,LOC105888873,LOC106589502)


Basic Information

Item Value
gene id AMCG00013096
gene name mprip,LOC105888873,LOC106589502
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 20685271 ~ 20734269 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013096
CAGGCCAAACCTATTTATGGAGGCTGGCTGTGTTTGGCACCCGAGGGAACAGATTTCGACAATCCAATGCAGAGATCAAGGaaaTGGCAGAGAAGATTCTTTGTTTTGTACGAGCACGGCTGTTTGCGCTTTGCTTTGGACGAGTCGCCCAGCACTCTGCCACAAGGAACTGTTAACATGAATCAGTGCACAGATGTCATTGATGCCGAGCCCAAGACAGGACAGAAGAATGCGCTTTGCATCATAACGCCAGAGCGAGAGTATTTCATCCGTGGCGAAAACAAAGAGATTATCAATGGGTGGCATGAACAGCTCGTTGTTTATCCAAGGACcaataaacaaaatcagaagAAGAAACGCAAGGTGGAGCCCACAACATCGCAGGAGCCTGGTCCAGCAAAGGTGGCTGTGACTGGTTCTGGGATTCCAGAGGCAGAGAAGGTCCCCGATTCCCGGTCAAGCATATGGCAGGAAGAGATCCACACCAGGGAGGTAGAAACAACACAGGCCTGGTCCCCATCAGACAGCAGTTCACTCGGCACAGCTTTGCCTCAAGGGGCAGAGGTGGCCCCAGTGGATCTGAATTCTGACCACGGCTCTGTCAACGGAGATGAGGTGGACAGGGGTGGGCTGCCTTTCCACGTGCCAGCGAGACATGACATTCAGGTCCTCTCCCCCAGCGGCAGCTCCTCCAGCCGACACAGTGCCGATCATGGGGGCGTCCCTCGCTGCCACTCTCCGGCTCACAGCGACCCCTTCCCCTCCGGCAGCAGCCTGCTTTCCAACGGCTCCCACATCAGTGGCTCCATGAGCTCTCTGGACTCGGACACCAGCGGGAGCACGGTGACCAGCACAGACAGCCACCACGCCGAGCTAAGGGCACAGAGGGCCTCAGCACTGCAAGACACTACTCGCTCCCGGAGGCACGAGATGGAGGCCCGGAAGGCAGAGAAACGCAGCCGAGTGAGGAGCCCAGAGCGACAGGACGGGGAGCCCCTGTTTGGGCCGGAGAAAAGTCGTTCCACTGTGATTGAGAAGCTCGAGGCCTTGGAGCTGGAAAACGCTGAGAGGATGGAGGTTGACGAGCAAGCTGGCCAAACCGCCGGCAGACAAGGCAGGAGTGAGACCCGGCGATTCCAGAAAGAGaattatGAAAGAGATTCAGCAAGAGGGTCTGATTTCCACCGTTCCACCATCCCTCCCTTAAGAAGAGCAAAATCGCTTGACCGGAGGACTACGGAATCCGTGATGACACCGGACTTGCTGAACTTCAAGAAAGGCTGGATGGTCAAACTGGATGAGCAGGGACAGTGGAAAAAGTACTGGTTTGTCCTGACTGACCACAGTTTACGTTACTATAAGGATTCAATTGCTGAAGAGgcgTCAGACCTGGATGGTGAAATAGATTTAACCACCTGTTACAATGTCACTGAGTACCAGGTCCAGAGGAACTACGGCTTCCAAATCCATACACAAGAATCAGTGTACACACTGTCGGCCATGACTGCAGGAATAAGGAGGAACTGGATCCAGGCGGTTTTGAAGAACGTGCGTCCATCCACCGCTCCTGATGTGGCCAGCCTGCCTGACGACCACGGCTCCTCCACCCCGCTGGACACCCTGCTGAAGCCTGACGTGACGCAGGACTCCCTGTCGTCGGAGGCCTCCTCAGCGGAGAGGGAACCCGGGCAGAAGAAAAGCCGTGCACGCgagaggaggcgagaagggcgCTCGAAAACCTTTGACTGGGCTGAATTCCGGCCGATCGCGCAGGCCCTGGCCCAGCAACGGGCCTGCGAGGCTGACCTGACTGACTTTGAGCGCACCAAGCGGCGAGAGGAGCGGAGGAAGAGATATGAGGTGGTGACGGGCACGCTGGACCCGAACGCCACCAACACCAACAAGATGGATGTCGAGAGCTGCGGCTCATCCAACTCACTGGAGAGACAGCAGAAGGTGCAGGATGAAATTGAACAGCAATGGCAACAGGTGGAACAAACTCCCATCAGGGATGAGCGCCGTGTACCACTCGCCTCCGCCTTACAAGGTAGAGAGACGGCCGAGTTAGAACGACTGTTGGAAAGTTACAAGAAAGGGGTAGAAGAGCTAAAAGCTCAGTTGGAAAGCTGTCATCAACAGCTGACTGATTCAAACCATCGCAAATTGGAACTGGAGGCACAACTTACGACCGCCCTGGAACGTGAACAGCAGATTCGTGCAGGTTATGTTTCTCCGCTGGAGTCCCCTTTGGGTCTTGATGCCGAGCTTGAGTCCCAGAAGAAGAGGCAAGATCTGATAAGTTCTCAAGCTCAGAACCTAAAAAAGAAGTACCAAGAAACCAAAGAACTCCTCCAGCAGCAAGAAATCAAAAAGGTCCAGCTAGGACTCTCTCTTTCCACACTGTTGGTCAAAGACCTGTCCCCCACAAAAACCCAGAGTCCCTCCTTTCCAGAAACCCCAAACCGAAACGATGAGCCTAGCCAGGAGACCCAAATGATGAAAAGATTCAGCCTAGTACTGcaagacagagaagaaaaactTCAAGAGCTCGAGTGCCTAATCTCGGTTTCCCCTCTAACTGTGAGCGCTCTGGCGAGACTGTTAGTCCATTGCGTTGACAAAAACGAACCAGGAAGCAGTGGAGACAAGACGTGCTGTCAGAAACTGTATGAAACCCTGAAGCTCCAGCGGGAAACTGAAAACGAGTCACTGAAGCGCAATTTGGCCAAGGCGGGGGAAAGCGTCCGCGAGTATGAGACACGTCTGCAGAACATGGAGGGCATGCTGGGGAGGGCGCAGAAGCAAAAGCTAGATAACCTGAAGAGCTGCGTGGCTCTGAGGCAGATGGAAGAGCATGTGGAGCTAAGCGATGCAACAGTTAAGAGGCTGGCCCAGGAGGTTGAGCTGCTGACAACCGAAAATGAGGTGTTGAACCAGCGCTGCCAGGAAATAGTGAATCAGCTGACAGAGGCAGATAGGGAGATCGAGAAGCTGAAGATAGAGCTTTTGAATCAGCAAGGAGGGCAGCAGCACCTGCAGGTAGTTGAGGAGCTGAACAAACTGAAAGCTAAACTGGCAGAAAAGGAGGCAGAGTTCATAGATAGGGATTTTTATGAGAGGGAGCTGAACATAGAATCTCAGAAGCTGCAGGAGGCGTTAATAAGGTTAGAAGTGCTGGGTAGCAGCTtgacagagacagaaaggaaGCTGCATCTAAAAGAGGCCACTCTGAAAGGCTTGGGTTTCCAGGTGGCTGAAGACAGCGAGACGCAGCTGCTTCTTGAAGAAAAGGAGCGTCTTTTTCAACAACTGGAGGCGACCGAGGCCAAGCTGTTGAAACAAGAGAAGCAACTAAAATGCGTAGAACACTCCTATAGGGAACTGCAGTCCCAGAACAgtgagctgaaattaaaacaggCAGAGCTGGATGAAGTGTACAGCCAAAGGCTTTTAGAGGCTGAGAGTAAAATTAGAATGCTACAGGTAGAAGTTGAGTGTGGGGGTAGGTCAGCAGGTGGGAAGAAAGCTCGGGATGGTGGCGCAGAAATGATGGAAGATTTTGGAAGTGCTATGTCAGACGAAAAGAAGGTTAAGCAAGTACTAGAACAGATAAAGCTAAAGTCAGCAGCTCTTAGTAAGGTGTCAGAAGTGTTAGAGAAGGTAGATATTAAAGTGAGCAAGGCGCGGAGTGAGTGGGGAAGCTCTGTTAGTGGATCAGGGTTTGTGCCTTCAGAAGGAGAGAGTCTGGAAGTGTATCGGTCGGTTCTTAGAAAGTTACTGCTAGAAGAAGAATTCTGGGGAAATGTGTCGAGCATCTCTGAGGTCAGATCAACTCAGCTGGATGAGAACGAACTTGCAGATAGTTTCTTACAGGAAATGTCAGAGCGCATGTTAGTcgaaaagaaaatgttgctcTGTGCCCATAGGCTTTTCCATCTGTCTGGAGCACAACAGTCTAAGCTGGACTTACAGCTTGCGAAAGATCCCAGCAGAGCCCTTGAAAATGAAGAGGCTGGGAAGATTCAAGGAGAGATGCCAGTGAAATTGGACATCATTGGGAATGTTCAAGGAGAAAATATCACAGAAAACAAGGATGAATTTTTGAATCTGTACAACTGGATCGATAATGACACTGACAACCTAGTCAAGAAAGAACTTATGCATGTCCTTCAGGTAAAGGTATCCTTGTTAAACCAAATTTCTTCCTCCATTCAGTCCTCTTCAAACGACGAGCTGATGTCTTTGGTTTTAAGGCTGTGTGATAGCTTAGAGTTCAGGAGCCAAAAGGAGCCCTGGTTAGCCTGCCTTCAGGATGCAGTCACACAGGCACACTTGTCCTATATCATCTGTAGATTAGACCTTGAGCACAGCAAGCAGCTTCACAAGATAAAAGAAGCCCAGCTGggactgaaaacaaatgaaacaaccTGCAAAAACTGTGTAgacttaaaaaaggaaaatgaagacTTCAAGACAAAGCTGGAAAGTGCGCAACAGGAGATTTTAGGCCTGAGAGGACCAAAGAGTGCAGAGAACATGCCAGTAACACACATCCAGATTGAGGGAGAGCCAATCGACTCCTTGGACAAAGCCATACAGCTTCAAGACATGGCTGCCAAGCACAAGAAAGAGCTCCGAGAAGTCAAGGACACCTACGAGCTGGAAGCCGAGAAACTCCGCCAAGAGATCAAAAAGGCAGGGGAGGTCTTGAGGCTAAAGTCAGAGGAGAACGTCAAGGAGATTGACTCCCTGACCGTCTGCATGGAGAACCTGAAGAAGAAGCACGAGATGGAGATGAAGAGGCAACAGGAGCAGAATTTGACTGAACGGAACAGCCTGGAAGAACAGTTTGTGAAGAAGTTGGAGAAGACAAAGCAAGAAGGCCAGGGTGACGGCCACCCAGAAGAGAACAAGCCCCATAACATGCTGGTGCTGAAAGAACGCATTGAAGAGCTGGAGTCTCAGATTAGCACCATGTCCGAAGAAATTAAACAGCGTGAAAGCGAAGGAGATATGTCGTCTCTCCAGCAGAAATATGACAAACACCTGGAAAACCTGAAGGCCACATGTGAGCGTGGTTTTGCTGCAATGGAAGAGTCCCACCAGAAAGTGATTGAAGAACTACAGAGGAAGCATCAGCGGGAGTTGGAGAACCTGCATGATGAGAAAGAGAGACTTCTGGCCGAAGAAACGGCTGCTACAATTGCGGCCATCGAAGCCATGAAAAACGCACATCGCACAGAGCTTGAGAGGGAACTAGACAAAGCTCGCAAGGcaaacaacaacactgaaaaTGCTGACATCGAAGAAATTCGCAGGCAACATGAAGAGGAGTTAGCATCCTTTCAACGGGAGATTGAAGTCCTCTCAGAGCAGTACTCGCAGAAGTGTCTGGAGAATGCCCACCTCGCCCAGGCTCTGGAGGCGGAGCGACAGGCTCTCAGGCAGTGCCAACGCGAGAATCAGGAGCTCAATTCGCACAACCAGGAACTGAATAATTGCCTGGCTGCTGAAATAACGAAGCTGAGATCAATGGTCACCAGTGAGGATGGCATCGACACCTGTACCTTAATACACGGCAAGGAGGTGTATGAGCTTGAGGTTATGTTGCGGGTGAAGGAATCCGAAGTTCAGTATCTGAAGCAGGAGATAAATTCCCTTAAAGATGAACTGCAGGCTGCTCAAAGAGACAAGAAGTATGCAACTGataaatataaagacatttaCACCGAACTCAGTATTGTGAAGGCCAAAGGAGAGAGGGATCTGTGTCGCCTCAGGGAGCAGTTACAGTTGGCCCACGAGGCGCTGGGGGAGCCCTCAATGGATGACGTGGATCGTAGTGGCTATGATATCATGAAGTCGAAAAGCAACCCAGACATCCTCAAGATGGCAGCAGCAGCGAAACGCTCAGAGAGGACATTGAGGTCAAAGAGTCTCAAGGAAGGTCTGACTGCTGAGCAGAGGCTCCATCTGTTCGACAACAAAGAGACAAAAGAGTTTTAACACCATTAAGACTATGAGCCTTGCTGCATGTTTATAGAGACACTATATTTTAGCCCAGTACTTAATCATCTAGAAATACAATGCTACACTGGTTACACAAGTCTTATTTTTAACACGGTATTAAGGTTTGATTTTATGTCTAGAAATTTGCATTCCATGCACTACAGTTACTGTGACTTTAGATCGCTATATCTCACTgtaaatattctgtattttttatggaGCATCTATCATGCTTATTCTAAACACTACTGTATAAGCTACGGTTTTAAACCTGCTCATCGTTCATGTAAATAGCCAAAGGAATAAGTCCAATTACAATGTGTCGCATCACAACTTGATGATCGGATATAATTTCAGAACAACTGTAGCGCTGTTATTGCCTTCGGGGTTTGTATGTGACGTGTTGatatgcacacattttaaagcgTCGCCTCGGTTTCCCTGACCATTTCAGTGCAAATGTTTGCTTGCTTATCAggacagaataaaataacatttgccTGCATCATTTTACAAGTTTAAACCTGGCTTGGCTTAACCATGCTTGTTAGCCTGTATAGTTCTGGTTTTGTAAATGGTGCATCAGCATCTTGCTgtaagttaaaacaaaaaaacaaaaaacataataataatattaataatattaaggaCCAATGAAGGCAATGGCTAAATTGACATGGATGGGAatggctgttattattttttttccattatgtaATCGTAATGGTTCGCTCAGCTGTATGGGAGTACAAAGGTTTTAAGTTGGTTATTTTTGTAGTGTTGTCCAGTGGCAGtttcctttgtatttatttaaatgtttggaCTTTTTTGTCTGAAGTTTCATTTCCCTGTACTCTGTCATTGTAAATACACAGCAAATGTACACCAACTGACTCCAGGTTTATTagcaataaatatttttgcacCATG

Function

symbol description
mprip Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization. Predicted to be active in actin cytoskeleton. Is expressed in habenula and ventral habenular nucleus. Orthologous to human MPRIP (myosin phosphatase Rho interacting protein).

NR:

description
PREDICTED: myosin phosphatase Rho-interacting protein-like isoform X1

GO: NA

KEGG:

id description
K23792 MPRIP; myosin phosphatase Rho-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013096 True 6939 mRNA 0.49 23 20685271 20734269

Neighbor

gene id symbol gene type direction distance location
AMCG00013094 NA coding downstream 4663 20646613 ~ 20680608 (-)
AMCG00013095 NA coding downstream 106794 20550867 ~ 20578477 (-)
AMCG00013084 NA coding downstream 239877 20406557 ~ 20445394 (-)
AMCG00013085 NA coding downstream 287410 20393654 ~ 20397861 (-)
AMCG00013083 NA coding downstream 313067 20369146 ~ 20372204 (-)
AMCG00013097 LOC103366163,LOC100708876,LOC103153053 coding upstream 13220 20747489 ~ 20760002 (-)
AMCG00013103 LOC104927391,LOC101078514,LOC101475813,LOC100711440 coding upstream 107349 20841618 ~ 20854064 (-)
AMCG00013102 rcvrn coding upstream 249767 20984036 ~ 20985885 (-)
AMCG00013106 gas7,LOC106589492 coding upstream 345337 21079606 ~ 21096419 (-)
AMCG00013114 LOC102780693,LOC101068441,LOC108261437,LOC101079795 coding upstream 513813 21248082 ~ 21263482 (-)
G42242 NA non-coding downstream 11043 20666345 ~ 20674228 (-)
G42136 NA non-coding downstream 280186 20401708 ~ 20405085 (-)
G42078 NA non-coding downstream 697536 19986243 ~ 19987735 (-)
G42058 NA non-coding downstream 908542 19776524 ~ 19776729 (-)
G42056 NA non-coding downstream 1000613 19684436 ~ 19684658 (-)
G42278 NA non-coding upstream 155414 20889683 ~ 20890288 (-)
G42376 myhz1.2,myhz1.1,LOC108415768,LOC102780693,LOC105899468 non-coding upstream 459880 21194149 ~ 21195350 (-)
G42378 LOC106596905,LOC106577420,LOC106569812 non-coding upstream 474996 21209265 ~ 21209649 (-)
G42372 LOC105910910,LOC103366176,LOC777984,LOC100705928 non-coding upstream 553051 21287320 ~ 21310348 (-)
G42382 NA non-coding upstream 606701 21340970 ~ 21427716 (-)
AMCG00013090 NA other downstream 139460 20531194 ~ 20545811 (-)
G42076 NA other downstream 702391 19980336 ~ 19982880 (-)
AMCG00013070 NA other downstream 1613853 19068245 ~ 19071418 (-)
AMCG00013071 rab37,LOC105012908,LOC106606976,LOC105901728,LOC108439461,LOC107746753,LOC107715539,LOC103393210,LOC108242943,LOC101475770,LOC108278300 other downstream 1662493 18977060 ~ 19022778 (-)
AMCG00013051 NA other downstream 2420428 18258089 ~ 18264843 (-)
G42366 myhz2,LOC106598369,LOC104955241 other upstream 517838 21252107 ~ 21301421 (-)
AMCG00013112 myhb,LOC106527115,LOC107667337,LOC107721187,LOC108440470 other upstream 565824 21300093 ~ 21311306 (-)
G42371 myhc4,LOC108412647,LOC107723326,LOC108415768,LOC105910910 other upstream 601948 21336217 ~ 21517177 (-)
G42381 LOC102793686,LOC103366176,LOC105910910 other upstream 602798 21337067 ~ 21375763 (-)
G42375 LOC108261476,LOC105030495,LOC108261437,LOC108254801,LOC108254800,LOC108417520 other upstream 616391 21350660 ~ 21360107 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G215686 NA non-coding NC_053132.1 CM020929.1 25805970 ~ 25806471 (-)