AMCG00013106 (gas7,LOC106589492)


Basic Information

Item Value
gene id AMCG00013106
gene name gas7,LOC106589492
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21079606 ~ 21096419 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013106
ATAAACTGTGTGACATTCCCCCTCCCCATTACCATGCCTGAACAGCAGCTACTAAAACCGAGCGAGTGGAGCTACTGCGATTACTTCTGGGCGGACAAAAAAGACCCCCAGGGGAATGCCTCAGTGACAGGTTTTGAGGTTTTGCTTCAGAAACAACTTAAGGGCAAGCAGATGCAGAAAGAAATGGCAGAATTCATCCGGGAAAGAATAAAAATTGAAGAAGAATATGCCAAGAACCTTTCAAAGCTTTCCCAGATTCCACTGGCAGCACAGGAAGAAGgCACACTGGGAGAAGCCTGGGCCCAGCTGAAGAAAAGCCTGACAGATGAGGCCGAAGTTCATCTGAAGTTTTCATCCAAGCTGCAAAGTGAAGTGGAGAAACCCCTGCTTACATTCCGAGACAACTTCAAGAAGGACATGAAGAAGTTCGACCATCACATCACCGACCTCAGAAAACAACTGGCTAGCCGCTACGCAGCAGTGGAGAAGTCACGCAAAGCACTGGCTGAGCGGCAGAAAGATCTGGAGatgaaaacacaacagtttGAGATCAAGCTGAGCAACAAAACAGAGGAAGACATCAAGAAGGCCAGGCGGAAATCAACACAAGCAGGCGATGAATTGATGCGCTGCGTAGACCTTTATAATCAGTCCCAGTCCAAGTGGTTTGAAGAGATGGTAACCTCAAGTCTGGAACTGGAGAGACTCGAGGTGGAACGTGTCGAAATGATCCGACAGCATCTTTGTCAGTACACAACGCTACGGCATGAAACAGACATGTTCAACCAAAGTACTGTGGAGCCAGTAGATCAGCTACTTCAGAAGGTTGACCCTGCCAAAGACAGAGAGCAGTGGGTGAAAGAGCACCGGACTGGAGACATCAGACCAGTGGATATGGAGATCTAG

Function

symbol description
gas7 Enables identical protein binding activity. Predicted to be involved in actin filament polymerization and neuron projection morphogenesis. Predicted to act upstream of or within actin filament bundle assembly; neuron differentiation; and regulation of cell shape. Predicted to be located in ruffle. Predicted to be active in actin filament; cytoplasm; and plasma membrane.

NR:

description
PREDICTED: growth arrest-specific protein 7

GO: NA

KEGG:

id description
K18618 GAS7; growth arrest-specific protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013106 True 906 mRNA 0.48 9 21079606 21096419

Neighbor

gene id symbol gene type direction distance location
AMCG00013102 rcvrn coding downstream 93721 20984036 ~ 20985885 (-)
AMCG00013103 LOC104927391,LOC101078514,LOC101475813,LOC100711440 coding downstream 225542 20841618 ~ 20854064 (-)
AMCG00013097 LOC103366163,LOC100708876,LOC103153053 coding downstream 319604 20747489 ~ 20760002 (-)
AMCG00013096 mprip,LOC105888873,LOC106589502 coding downstream 345337 20685271 ~ 20734269 (-)
AMCG00013094 NA coding downstream 398998 20646613 ~ 20680608 (-)
AMCG00013114 LOC102780693,LOC101068441,LOC108261437,LOC101079795 coding upstream 151663 21248082 ~ 21263482 (-)
AMCG00013117 NA coding upstream 173930 21270349 ~ 21278662 (-)
AMCG00013111 LOC100705928,LOC100710639,LOC102793686,LOC101481850,LOC108254796,LOC106589491,LOC102288653 coding upstream 190727 21287146 ~ 21289069 (-)
AMCG00013113 myhz1.1,ns:zf-e68,myhz1.2,LOC108444092,LOC105902796,LOC108254796,LOC108443910,LOC103370565 coding upstream 231781 21328200 ~ 21335131 (-)
AMCG00013110 LOC100705928,LOC102793686,LOC101481850,LOC100710639,LOC102197206,LOC102288653,LOC106589491 coding upstream 239738 21336157 ~ 21338083 (-)
G42278 NA non-coding downstream 189318 20889683 ~ 20890288 (-)
G42242 NA non-coding downstream 405378 20666345 ~ 20674228 (-)
G42136 NA non-coding downstream 674521 20401708 ~ 20405085 (-)
G42078 NA non-coding downstream 1091871 19986243 ~ 19987735 (-)
G42058 NA non-coding downstream 1302877 19776524 ~ 19776729 (-)
G42376 myhz1.2,myhz1.1,LOC108415768,LOC102780693,LOC105899468 non-coding upstream 97730 21194149 ~ 21195350 (-)
G42378 LOC106596905,LOC106577420,LOC106569812 non-coding upstream 112846 21209265 ~ 21209649 (-)
G42372 LOC105910910,LOC103366176,LOC777984,LOC100705928 non-coding upstream 190901 21287320 ~ 21310348 (-)
G42382 NA non-coding upstream 244551 21340970 ~ 21427716 (-)
G42383 NA non-coding upstream 250056 21346475 ~ 21346834 (-)
AMCG00013090 NA other downstream 533795 20531194 ~ 20545811 (-)
G42076 NA other downstream 1096726 19980336 ~ 19982880 (-)
AMCG00013070 NA other downstream 2008188 19068245 ~ 19071418 (-)
AMCG00013071 rab37,LOC105012908,LOC106606976,LOC105901728,LOC108439461,LOC107746753,LOC107715539,LOC103393210,LOC108242943,LOC101475770,LOC108278300 other downstream 2056828 18977060 ~ 19022778 (-)
AMCG00013051 NA other downstream 2814763 18258089 ~ 18264843 (-)
G42366 myhz2,LOC106598369,LOC104955241 other upstream 155688 21252107 ~ 21301421 (-)
AMCG00013112 myhb,LOC106527115,LOC107667337,LOC107721187,LOC108440470 other upstream 203674 21300093 ~ 21311306 (-)
G42371 myhc4,LOC108412647,LOC107723326,LOC108415768,LOC105910910 other upstream 239798 21336217 ~ 21517177 (-)
G42381 LOC102793686,LOC103366176,LOC105910910 other upstream 240648 21337067 ~ 21375763 (-)
G42375 LOC108261476,LOC105030495,LOC108261437,LOC108254801,LOC108254800,LOC108417520 other upstream 254241 21350660 ~ 21360107 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000047_07072890_07079236 GAS7B, GAS7 coding CI01000047 null 7072545 ~ 7079236 (-)