AMCG00013107 (wu:fd14a01,LOC108254800,LOC107571573)



Basic Information


Item Value
gene id AMCG00013107
gene name wu:fd14a01,LOC108254800,LOC107571573
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21185746 ~ 21216078 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00013107
ATGAGCAGCGATGCGGAAATGGGCATTTTCGGGGAGGCTGCCAAATACCTGCGCAAGTCGGAGAAGGAAAGGGTGGAGGCCCAGAATCGGGCCTTCGATGCCAGAACCGCTTGCTACGTGGATGATGACAAAGTGCTCTACGTGAAGGGTGTCATCCAGAGCAAGGAAGGTGGGAAAGTTACTGTGAAGACCGAGGATAATAGAACCATAACCGTGAAGGAGGACCAGGTTTACCCCATGAACCCTCCCAAGTACGACAAGATCGAGGACATGGCGATGATGACCCATCTGAATGAGCCCTGTGTTCTCTTTAACCTCAAGGAGCGTTATGCAGCATGGATGATTTATTACTTTGCCACAATCGCAGTGGCTTCGGACAAGAAGAAGGCAGAGTACACTAGCAACATTAAGGGAACCCTGGAAGATCAGATCATCCAGGCCAATCCTCTGTTAGAAGCCTTTGGTAATGCCAAGACTGTGAGAAATGACAACTCTTCACGCTTTGGTAAGTTTATTAGGATCCACTTTGGAGCAACTGGGAAACTGGCCTCAGCAGATATTGAAACATacaTGCTTCTAATTTCCACCAATCCCTATGACTTTGCCTATGTCAGCCAGGGTGAAATTGCTGTGAAGAGTATTGATGATGCAGCAGAATTGATGGCCACAGATGAAGCTATTGATATTCTTGGCTTCAGTGCTGATGAGAAAGTGGGCATCTACAAGCTGACTGGTGCCGTGATGCACCATGGCAACATGAAGTTCAAGCAGAAGCAACGTGAGGAGCAGGCTGAGCCTGACGGCACCGAGGAGGCTGATAAAGCTGCTTACTTGATGGGTCTTAATTCTTCTGATCTTCTAAAAAATCTCTGTTACCCCAGAGTGAAGGTGGGCAATGAATTTGTTACCAAGGGCCAGAGTGTTCAACAGGTGTATAACTCCATTGGTGCCCTGGCTAAGTCCATCTATGAGAAGATGTTTCTCTGGATGGTTGTCCGCATTAACCACCAGCTGGACACCAAGCAGGCCAGACAGCATTTCATTGGTGTTCTGGATATTGCTGGATTTGAGATCTTTGATGTGTTCTTTAAAGCTGGTCTTCTCGGTACTCTTGAGGAACTTAGAGATGAACGTCTTGCTCAGCTTGTGATGTGTACCCAAGCGATTTGTCGTGGGCACCTGATGAGGAATGAATTCAAGAAAATGATGCAAAGAAGGGAGGCACTCTTTACTATCCAATACAATATCCGCTCATTCATGAATGTGAAACACTGGCCCTGGATGAAGCTGTACTTCAAGATCAAGCCTCTTCTGCAGAGTGCAGAGGCAGAGAAAGAAATGTCCAACATGAAAGAAGAGTTTGCCAAGTGCAAGGAAGATCTAGCCAAATCTGAAACCAGAAGGAAAGAGCTTGAGGAGAAAATGGTCTCCATTGTCCAAGAAAAGAATGACCTCCTTCTTCAAGTTCAATCGCTTGAGGGCTCACTGGAACAAGAGAAGAAGCTTCGCATGGACCTTGAGAGAGCTAAGAGGAAGCTGGAAGGTGATCTGAAACTATCCCAGGAATATATTATGGATTTGGAAAATGAAAGACAGCAAACAGAGGAGAAATTGAAGAAGAAAGACTTTGAAGTCTCTCAGCTACAAGGAAAGATTGAAGATGAGCAAGCTCTTGGAGCTCAattgcaaaagaaaattaaagagtTGCACGCCCGTATTGAAGAGCTGGAAGAAGAAATCGAGGCTGAACGTGCTGCTCGGGCCAAGGTTGAGAAGCAGAGGGCTGATCTCTCCAGGGAATTGGAGGACATCAGTGAAAGACTTGAAGAGGCTGGTGGTGCCACTTCTGCTCAGATTGAGATGAACAAGAAACGTGAAGCTGAGTTCCAGAAGCTCCGCCGCGACCTTGAAGAGTCGACTCTGCAGCATGAGGCCACCGCTGCTGCCCTCCGCAAGAAGCAGGCTGACAGCGTGGCAGAATTAGGAGAACAGATTGACAACCTTCAACGTGTCAAGCAAaagctggagaaggagaagagtgAACTGAAGATGGAAGTGGATGATCTTTCAAGTAACATGGAGTCCGTTGCTAAATCCAAATGCAACCTTGAAAAGATGTGCCGCTCATTGGAGGATCAGCTGATGGAAGTCAAGATAAAAGAAGATGAGAATAATAGACTGGTCAATGAGCTTACGACTCAGAAATCACGCCTCCAGACAGAGAATGCTGAAGTGTCTCGACAGCTGGACGAAAAGGAATCTTTAGTGTCACAGCTGACGAGAGGGAAGCTAGTTTTAACCCAGCAGACTGAGGACCTTAAAAGGCTACATGAAGAAGAAATTAAGGCTAAAAATGCTCTGGCTCATGCTTTGCAATCATCTCGCCATGACTGTGACCTCCTTCGAGAGCAGTttgaggaggagcaggaggccaAGGCTGAACTTCAGCGTGGAATGTCCAAGGCCAACAGTGAAGTGGCACAGTGGAGAACAAAATACGAAACTGACGCCATCCAGCGCACTGAGGAGCTTGAGGAGGCCAAAAAAAAGCTTGCCCAGCGATTACAGGAAGCTGAGGAGTTAATTGAGGCAACAAACTCCAAGTGCTCTTCTCTGGAGAAGACCAAGCAGAGACTGCTGGGTGAAGTGGAGGATCTGATGATGGATGTAGAGAGAGCTAATACTACTGCTGGGGCACTTGATAAGAAGCAGAGGAACTTTGACAAgGTCCTGGCAGAATGGAAACAGAAGTACGAGGAAAGCCAAGCAGAACTGGAAGCTGCTCTGAAGGAGGTTCGCTCTGTGCACACAGAGAATTTCAAACTGAGAAATGCTTACGAGGAGTCATTGGAGCTTCTTGAAACACTGAAACGAGAAAACAAGAACCTGCAACaggAGATTACTGATCTGACGGAGCAGTTTGGAGATGCTTATAAGACCATCCACGAGTTGGAGAAGgcaaaaaaacaagcagagcAGGAGAGGGCAGAGATCCATACTGCCTTGGAGGAAGCTGAGGCATCGCTTGAACATGAAGAGAGCAAGATTCTCCGTGTGCAACTAGAGCTGAACCAGGTAAAGTCTGAGGTGGACAGGAAAATCGCAGAGAAGGATGAGGAGATTGATCAAATGAAGAGGAACAACCAGAGAGTTGTGGATTCCCTGCAAGGTACCTTGGACTCTGAGGTCAGAAGCCGCAATGATTCCCTGAGAGTGAAGAAGAAGATGGAGGGGGATCTCAATGAGATGGAAATTCAGCTGGGTCACGCCAACCGCCAGGCCAACGAATCACAGAAACAGCTGAGAAACATCCAGGCACAGTTTAAGGAGGCACAGCTGCAACTGGATGATGCTCTTAGAGGACAGGAGGACATGAAGGAACAGGTTGCCATGGTGGAGCGCAGGAACACCCTCATGATGGCTGAGATTGAGGAAATGAGGGCTGCCCTggaacagacagagagaggccgCAAAGTGGCTGAACAGGAACTGGTTGATGCCAGTGAGCGTGTGCAGCTGCTGCACTCCCAGaaTATTAGCCTCCTCAATAGCAAAAAGAAGCTTGAGAGCGACTTTGGTAACCTTCAGGGAGAGGTTGATGAAATGATCCAGGAGACCAGGAATGCTGATGAAAAAGCCAAGAAGGCCATCACTGATGCTGCCATGATGGCTGAGGAGCTGAAGAAGGAGCAGGACACCAGCTCTCACCTGGAGAGAATGAAGAAGAACCTGGAGGTGCGTGAGCTGGAGAATGAACTTGAGATGGAGCAGAAGCAAAGAGTGGAGGGCATCAAGGGTGTGCGCAAATATGAAAGAAAGGTCAAGGAGGTGACATATCAGTCTGAAGAGGACAGAAAGACAATTGCAAGACTCCAGGATCTGGTCGACAAACTCCAGCTGAAGGTCAAGGCCTACAAGAGACAGGCTGAGGAGGCTaGAACCACCACCATGAGTTCTGACGGGGAAATGGCGATTTTTGGGGAAGCCGCCCAATTTCTCCGGAAGTCGGAGAAAGAGAGACTGGAAGCACAGAGTCGTCCGTTTGATGCAAGAACTGCCTGTTATGTACACGATGACAAGGAACTTTATGTTAAGGGTCTTATCCAGTCTAAAGATGGTGGCAAAGTCACTGTTAAGGTCAATGACGACAAAactgTAACAGTTAAGGATGATCAAGTCTTCCCAATGAATCCTCCCAAGTACGACAAAATTGAGGACATGGCGATGATGACCCACCTGAACGAGCCCGCTGTGCTGTTTAACCTGAAAGAGCGTTACGCAGCATGGATGATCTATACATACTCGGGTCTTTTCTGTGTCACTGTCAACCCCTACAAGTGGCTGCCAGTGTACAACCCAGAAGTTGTTAAAAATTACAGAGGCAAGAAGCGAATGGAGGTGCCTCCTCACATCTTTGCCCTCTCTGACAACGCTTATCAGGCTATGCTCACGGatcGTGAAAACCAGTCTATTTTGATCACTGGAGAATCCGGTGCGGGGAAGACTGTGAACACAAAACGTGTCATCCAATACTTTGCGACAATTGCAGTGTCTGCGGACAAGAAGAAGGAGCAAAGCAACAAAATGAAGGGAACACTGGAGGATCAAATCATCCAGGCCAATCCTCTGTTAGAAGCCTTTGGTAACGCCAAGACTGTGAGAAATGACAACTCCTCACGTTTTGGTAAATTCATCCGAATCCACTTTGGGCCAAGTGGGAAACTGTCGTCGGCTGATATTGAAACATATCTTCTGGAAAAATCCAGAGTGACGTTTCAGTTATCCGCTGAAAGAAGCTATCATATCTTCTACCAACTCACCTGCAACAAGAAGCCTGAACTTATTGATATGCTCCTCATCACCACCAATCCATACGACTTTTCCTTCATCAGCCAAGGTGAAATAGCTGTGAAGAGCATCGATGACGCAGATGAGTTGATGGCTACAGATGAAGCTATCGACATTCTGGGCTTCACTAATGAAGAGAAATTGGGCATCTACAAGCTGACTGGTGCCGTGATGCACTACGGTAACATGAGGTTCAAGCAGAAGCAACGTGAGGAGCAGGCTGAGCCCGATGGCACTGAAGGTACACACTACGGTGAAACAGTGTATAACGCCATTGGTGCCCTGGCTAAGTCCGTCTATGAGAAGATGTTCTTGTGGATGGTGCTCCGTATTAACCAGCAGCTGGACACCAAGCAGCCCAGACAGCACTTCATTGGTGTGCTGGATATTGCCGGATTTGAGATCTTTGATGTGTTCTTCAAAGCTGGATTACTTGGTGTTCTTGAAGAGATGAGAGATGAGCGTCTCGCACAAGTGGTAACATGTACTCAAGCTGTGTGCCGTGGATACCTTGTAAGGATTGAATATAATAAGATGATAGAGAGAAGGGAAGCCCTGTTTACCATTCAGTACAATATCCGCTCATTCATGAATGTGAAACACTGGCCATGGATGAAGATGTACTTCAAGATCAAGCCTCTCCTGAAGAGTGCGGAAACTGAGAAGGAAATGGCCACGATGAAAGAAGACTTTGCCAAGTGCAAGGAAGATCTGACCAAGTCAGATGCCAGAAGGAAGGAACTTGAGGAGAAAATGGTCTCCATTGTTCAAGAAAAGAACGACCTACTTCTTCAAGTTCAATCGtTAGAGGGATCACTGGAACAAGAGAAGAAAATTCGCATGGACCTAGAGAGGGCCAAGAGAAAGCTTGAGGGTGATCTGAAATTAGCCCAGGAATCCATAATGGATTtggaaaatgacaaacaacagTTGGATGAAAAGCTCAAGAAGAAAGACTTTGAAGTTACTCAGCTGCAAGGGAAAATTGAAGATGAGCAAGCTCTTGGGGCTCAACTGCAGAAGAAAATTAAGGAGCTGCAGGCACGCATTGAAGAGCTGGAAGAAGAAATTGAGGCTGAACGTGCTGCTCGGGCCAAGGTTGAGAAGCAGAGGGCTGATCTTTCCAGGGAACTTGAGGAGATCAGCGAAAGGCTTGAAGAGGCTGGTGGTGCAACCTCGGCTCAGATTGAGATGAACAAGAAACGCGAAGCTGAGTTCCAGAAACTCCGCCGTGACCTTGAAGAGTCGACTCTGCAACATGAAGCCACCGCTGCTGCCCTCCGCAAGAAGCATGCTGACTCTGTGGCAGAACTTGGGGAGCAAATTGACAACCTACAGCGTGTAAAACAGAAACTTGAGAAGGAGAAGAGTGAGCTGAAAATGGAAGTGGATGATCTCTCCAGCAACATGGAGTCTATTGCCAAGTCTAAAGCCAATCTTGAAAAGATGTGCCGCTCTCTAGAAGATCAGCTAAGTGAATTAAAGGCAAAAGACGATGATCTTCAGAGACAGAATAATGACCTTACAACTCAGAAATCCCGTTTCCAGACAGAGAATGGGGAAATGTCTCGTCAACTTGAAGAAAAGGATTCCTTGGTGTCTCAGTTAACCAGGGGAAAAGTGGCTTATACTCAGCAAGTTGAAGAACTGAAAAGGCTGAATGAAGAGGAAATCAAGGCTAAAAATGCTCTGGCTCATGCTTTGCAATCAGCCCGTCATGACTGTGATCTCCTACGAGAGCAGTttgaggaggagcaggaggccaAGGCTGAACTTCAGCGCGGAATGTCCAAGGCCAACAGTGAAGTGGCTCAGAAAAAGTTGGCTCAACGTTTACAAGATGCTGAGGAAGCAGTCGAGGCAACAAACTCCAAGTGCTCTTCCCTGGAGAAGACCAAGCAGAGACTGCAGAGTGAAGTGGAGGATCTGATGATGGATGTGGAAAAGGCCAACTCTGCTGCGGCTGCCCTTgataagaaacaaagaaactttGACAAGGTCCTGGCAGAATGGAAGCAGAAGTACGAAGAAAGCCAAGCAGAACTGGAAGGTGCACTGAAGGAGGTCCGCTCCATGGGAACTGAGAACTTCAAGATGAAGAATGCTTATGAAGAATCATTAGAGCATCTTGAAACACTGAAACGTGAAAACAAGAACCTGCAACAGGAGATTTCAGATCTCACTGAGCAGCTTGGCGAAACTGGCAAGAGCATTCATGAGCTGGAGAAAGCCAAGAAACAAGCAGAACAGGAAAAAGCTGAGATTCAGACAGCTTTGGAAGAGGCAGAGGCATCCCTGGAGCATGAAGAGAGCAAGATTCTCCGTGTGCAACTAGAGCTGAACCAGGTGAAGTCTGAGGTAGACAGGAAAATCTCGGAGAAGGATGAGGAGATTGAGCAACTGAAGAGGAACAACCAGAGAGTTGTAGACTCACTGCAGAGTACCTTGGATTCTGAGGTCAGGAGCCGCAACGATGCCCTGAGAGTGAAAAAGAAGATGGAGGGGGATCTCAATGAGATGGAAATACAGCTGGGTCACGCCAACCGCCAGGCCTGCGAATCACAGAAACACCTGAGGAACATCCAGGCACAGCTTAAGGAAGCTCAGTTGCACCTTGATGATTCCATGAGAAGCAGCGATGACATGAAGGAACAGGTTGCCATGGCGGAACGCAGGAGCAACCTGATGCAGGCTGAGATTGAGGAAATGAGGGCTGCCCtggaacagacagacagaagccGCAAAGTGGCTGAACAGGAACTGGTTGATGCAAGTGAGCGTGTGCAGCTGCTGCACTCCCAGaataCTAGTTTGATCAACACCAGGAAGAAGCTGGAGAGTGATTTTTCACAGCTTCAAAGTGAGGTGGAGGACACAATCCAAGAAGCCAGGAATGCCGATGAGAAAGCCAAGAAGGCCATCACTGATGCTGCCATGATGGCTGAGGAGCTGAAGAAGGAGCAGGACACCAGCGCTCATCTGGAGAGAATGAAGAAGAACCTGGAGGTCACAGTGAAGGACCTGCAGCACCGTCTGGATGAGGCTGAGCAGCTGGCAATGAAGGGTGGAAAGAAGCAGCTCCAGAAACTGGAGTCTAGGGTGCGTGAGCTGGAAAATGAACTTGAAGCAGAACAGAAGCACAGTTCTGATTCAGTGAAGGGTGTAAGGAAGTATGAGCGGAGAGTCAAGGAGCTGTCATATCAGTCTGAGGAGGATAAGAAGAACATCCTCAGACTACAAGATCTGGTTGACAAACTCCAGTTGAAGGTCAAGGCCTACAAGAGACAAGCAGAGGAGTCTGGAAAAGACAACCAGGAGTAA

Function


NR:

description
myosin heavy chain, fast skeletal muscle

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0001757 somite specification biological_process
GO:0032982 myosin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0005516 calmodulin binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00013107 True 8169 mRNA 0.48 55 21185746 21216078

Neighbor


gene id symbol gene type direction distance location
AMCG00013105 NA coding upstream 109987 21029565 ~ 21075759 (+)
AMCG00013104 pts coding upstream 186436 20988853 ~ 20999310 (+)
AMCG00013100 NA coding upstream 205504 20960421 ~ 20980242 (+)
AMCG00013101 NA coding upstream 354747 20817521 ~ 20830999 (+)
AMCG00013098 NA coding upstream 410445 20773228 ~ 20775301 (+)
AMCG00013109 NA coding downstream 49112 21265190 ~ 21269791 (+)
AMCG00013108 NA coding downstream 53978 21270056 ~ 21285838 (+)
AMCG00013122 LOC108261602,LOC108254796 coding downstream 124932 21341010 ~ 21343727 (+)
AMCG00013123 NA coding downstream 127786 21343864 ~ 21345063 (+)
AMCG00013121 NA coding downstream 134584 21350662 ~ 21359707 (+)
G42277 NA non-coding upstream 295414 20889675 ~ 20890332 (+)
G42269 NA non-coding upstream 345186 20839589 ~ 20840560 (+)
G42177 NA non-coding upstream 558412 20627094 ~ 20627334 (+)
G42172 NA non-coding upstream 633929 20551260 ~ 20551817 (+)
G42127 NA non-coding upstream 793137 20387684 ~ 20392609 (+)
G42330 LOC106589491,LOC105023009,LOC103368359,LOC100710639,LOC102784652,LOC102295130 non-coding downstream 40507 21256585 ~ 21304213 (+)
G42331 LOC100710639,LOC102784652,LOC102295130,LOC102192639,LOC101477534,LOC108412652 non-coding downstream 148026 21364104 ~ 21411989 (+)
G42345 LOC777982,LOC104957706 non-coding downstream 256638 21472716 ~ 21508824 (+)
G42347 NA non-coding downstream 282895 21498973 ~ 21503924 (+)
G42350 NA non-coding downstream 312703 21528781 ~ 21600968 (+)
G41978 NA other upstream 2156468 19025561 ~ 19029278 (+)
AMCG00013068 NA other upstream 2211384 18967429 ~ 18974362 (+)
AMCG00013047 NA other upstream 2955508 18158842 ~ 18230238 (+)
AMCG00013015 NA other upstream 4456213 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 5394119 15782364 ~ 15791627 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 53597 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 69953 21286031 ~ 21471560 (+)
AMCG00013126 myhb,LOC108443910 other downstream 154765 21370843 ~ 21421316 (+)
G42344 LOC108412647 other downstream 210582 21426660 ~ 21486808 (+)
G42453 NA other downstream 1026351 22242429 ~ 22245790 (+)

Expression



Co-expression Network