AMCG00013110 (LOC100705928,LOC102793686,LOC101481850,LOC100710639,LOC102197206,LOC102288653,LOC106589491)


Basic Information

Item Value
gene id AMCG00013110
gene name LOC100705928,LOC102793686,LOC101481850,LOC100710639,LOC102197206,LOC102288653,LOC106589491
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21336157 ~ 21338083 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013110
ATGAGTACAGATGCGGAGATGGCCGTTTTTGGCCCGGCTGCCATATACCTGAGGAagcctgagagggagagaattgAGGCTCAGAACAAACCCTTTGATGCTaaaactgctgtgtttgtgtctgagcCCAAGGAGTTGTACCTTAAAGGTACTCTCCAGAGCAAAGAAGGGGGCAAAGCCACTGTAAAAACAGAGGGAGGCCAAACTCTAACAGTTAAGGAAGATGAAGTCTTCCCCATGAATCCTCCTAAGTTTGATAAAATTGAGGACATGGCGATGATGACCCACCTCAATGAAGCCTCTGTGCTGTATAACCTCAAAGAGCGTTACGCAGCATGGATGATCTACACCTACTCTGGGCTGTTTTGTGTAACTGTGAACCCCTACAAGTGGCTCCCAGTGTACAACCCAGAAGTTGTGACAGCGTACAGAGGCAAAAAGCGCATGGAGGCTCCACCACACATCTTCTCTGTCTCTGATAATGCCTATCAGAACATGCTCACTGATCGTGAGAACCAGTCCGTCCTGATTACTGGAGAATCTGGTGCTGGAAAGACTGTGAACACGAAACGTGTCATCCAGTACTTTGCGACAATCGCAGTGTCTGGGGAAAAGAAAGCTCCAGATCCTGGCAAAATGCAGGGAACCCTGGAGGATCAAATCATCTCAGCCAACCCTCTGCTGGAGGCTTTTGGTAATGCCAAGACAGTGAGGAATGACAACTCCTCTCGCTTTgGTAAATTCATCAGAATCCATTTTGGAACTACAGGAAAACTAGCTTCTGCTGATATTGAGACTTATTTGCTGGAGAAGTCCAGAGTAACATTCCAGCTGTCTGATGAAAGGAGCTACCACATCTTTTATCAGATCATGACCAACCACAAGCCTGAGCTTATTGACATGCTTCTGATCACCACCAATCCCTATGACTTCCCTATGATCAGCCAGGGTCAGATCTCTGTGGCCAGCATTGATGACAAAGAGGAGCTGGTTGCCACAGATacTGCCATTGATATTCTGGGGTTTACAAGTGAGGAGAAAACAGGCATTTACAAGCTGACTGGTGCTGTGATGCACCAC

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013110 True 1080 mRNA 0.47 10 21336157 21338083

Neighbor

gene id symbol gene type direction distance location
AMCG00013113 myhz1.1,ns:zf-e68,myhz1.2,LOC108444092,LOC105902796,LOC108254796,LOC108443910,LOC103370565 coding downstream 1026 21328200 ~ 21335131 (-)
AMCG00013111 LOC100705928,LOC100710639,LOC102793686,LOC101481850,LOC108254796,LOC106589491,LOC102288653 coding downstream 47088 21287146 ~ 21289069 (-)
AMCG00013117 NA coding downstream 57495 21270349 ~ 21278662 (-)
AMCG00013114 LOC102780693,LOC101068441,LOC108261437,LOC101079795 coding downstream 72675 21248082 ~ 21263482 (-)
AMCG00013106 gas7,LOC106589492 coding downstream 239738 21079606 ~ 21096419 (-)
AMCG00013116 ns:zf-e68,LOC106569812,LOC108254801,LOC108261476,LOC108261437,LOC106569813 coding upstream 12376 21350459 ~ 21350814 (-)
AMCG00013115 LOC108412647,LOC100705928,LOC102793686,LOC105910910 coding upstream 13180 21351263 ~ 21375164 (-)
AMCG00013138 LOC103399676,LOC107571695 coding upstream 56193 21394276 ~ 21398255 (-)
AMCG00013136 LOC107571695,LOC108418072 coding upstream 113949 21452032 ~ 21454895 (-)
AMCG00013132 myhz1.1,ns:zf-e68,myhz1.2,myhz2,myhc4 coding upstream 130946 21469029 ~ 21474368 (-)
G42372 LOC105910910,LOC103366176,LOC777984,LOC100705928 non-coding downstream 25809 21287320 ~ 21310348 (-)
G42378 LOC106596905,LOC106577420,LOC106569812 non-coding downstream 126508 21209265 ~ 21209649 (-)
G42376 myhz1.2,myhz1.1,LOC108415768,LOC102780693,LOC105899468 non-coding downstream 140807 21194149 ~ 21195350 (-)
G42278 NA non-coding downstream 445869 20889683 ~ 20890288 (-)
G42242 NA non-coding downstream 661929 20666345 ~ 20674228 (-)
G42382 NA non-coding upstream 2887 21340970 ~ 21427716 (-)
G42383 NA non-coding upstream 8392 21346475 ~ 21346834 (-)
G42386 NA non-coding upstream 61561 21399644 ~ 21400158 (-)
G42440 dnah9 non-coding upstream 555541 21893624 ~ 21905597 (-)
G42450 NA non-coding upstream 811498 22149581 ~ 22149792 (-)
AMCG00013112 myhb,LOC106527115,LOC107667337,LOC107721187,LOC108440470 other downstream 24851 21300093 ~ 21311306 (-)
G42366 myhz2,LOC106598369,LOC104955241 other downstream 34736 21252107 ~ 21301421 (-)
AMCG00013090 NA other downstream 790346 20531194 ~ 20545811 (-)
G42076 NA other downstream 1353277 19980336 ~ 19982880 (-)
AMCG00013070 NA other downstream 2264739 19068245 ~ 19071418 (-)
G42375 LOC108261476,LOC105030495,LOC108261437,LOC108254801,LOC108254800,LOC108417520 other upstream 12577 21350660 ~ 21360107 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other upstream 73856 21411939 ~ 21422118 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other upstream 110246 21448329 ~ 21449954 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other upstream 165766 21503849 ~ 21526832 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other upstream 2488526 23826609 ~ 23839146 (-)

Expression


Co-expression Network