AMCG00013117


Basic Information

Item Value
gene id AMCG00013117
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21270349 ~ 21278662 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013117
ATGCTGTCGGCCTGCTTCTTACGGAGGGCAGCAGCGGTGGCCTCGTGCTGGAGAGTCGACTCTTCGAGTTTCTGGAGCTGCTTCTTTCCACCCTTCATTGCCAGCTGCTCAGCCTCATCCAAACGGTGCTGCAGGTCCTTCACTGTGACCTCCAAGTTCTTCTTCATTCTCTCCAGTGTCATCAACTTCACCTTGGAGCTGAGAGATGTCACTCTCAAGCTTCTTCTTGACTTGGCTACAGACTCCATGTTGCTGGAGAGGTCGTCgatttccattttgtattcactcttctccttctccagcttctGCTTGACCCGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013117 True 321 mRNA 0.52 4 21270349 21278662

Neighbor

gene id symbol gene type direction distance location
AMCG00013114 LOC102780693,LOC101068441,LOC108261437,LOC101079795 coding downstream 6867 21248082 ~ 21263482 (-)
AMCG00013106 gas7,LOC106589492 coding downstream 173930 21079606 ~ 21096419 (-)
AMCG00013102 rcvrn coding downstream 284464 20984036 ~ 20985885 (-)
AMCG00013103 LOC104927391,LOC101078514,LOC101475813,LOC100711440 coding downstream 416285 20841618 ~ 20854064 (-)
AMCG00013097 LOC103366163,LOC100708876,LOC103153053 coding downstream 510347 20747489 ~ 20760002 (-)
AMCG00013111 LOC100705928,LOC100710639,LOC102793686,LOC101481850,LOC108254796,LOC106589491,LOC102288653 coding upstream 8484 21287146 ~ 21289069 (-)
AMCG00013113 myhz1.1,ns:zf-e68,myhz1.2,LOC108444092,LOC105902796,LOC108254796,LOC108443910,LOC103370565 coding upstream 49538 21328200 ~ 21335131 (-)
AMCG00013110 LOC100705928,LOC102793686,LOC101481850,LOC100710639,LOC102197206,LOC102288653,LOC106589491 coding upstream 57495 21336157 ~ 21338083 (-)
AMCG00013116 ns:zf-e68,LOC106569812,LOC108254801,LOC108261476,LOC108261437,LOC106569813 coding upstream 71797 21350459 ~ 21350814 (-)
AMCG00013115 LOC108412647,LOC100705928,LOC102793686,LOC105910910 coding upstream 72601 21351263 ~ 21375164 (-)
G42378 LOC106596905,LOC106577420,LOC106569812 non-coding downstream 60700 21209265 ~ 21209649 (-)
G42376 myhz1.2,myhz1.1,LOC108415768,LOC102780693,LOC105899468 non-coding downstream 74999 21194149 ~ 21195350 (-)
G42278 NA non-coding downstream 380061 20889683 ~ 20890288 (-)
G42242 NA non-coding downstream 596121 20666345 ~ 20674228 (-)
G42136 NA non-coding downstream 865264 20401708 ~ 20405085 (-)
G42372 LOC105910910,LOC103366176,LOC777984,LOC100705928 non-coding upstream 8658 21287320 ~ 21310348 (-)
G42382 NA non-coding upstream 62308 21340970 ~ 21427716 (-)
G42383 NA non-coding upstream 67813 21346475 ~ 21346834 (-)
G42386 NA non-coding upstream 120982 21399644 ~ 21400158 (-)
G42440 dnah9 non-coding upstream 614962 21893624 ~ 21905597 (-)
AMCG00013090 NA other downstream 724538 20531194 ~ 20545811 (-)
G42076 NA other downstream 1287469 19980336 ~ 19982880 (-)
AMCG00013070 NA other downstream 2198931 19068245 ~ 19071418 (-)
AMCG00013071 rab37,LOC105012908,LOC106606976,LOC105901728,LOC108439461,LOC107746753,LOC107715539,LOC103393210,LOC108242943,LOC101475770,LOC108278300 other downstream 2247571 18977060 ~ 19022778 (-)
AMCG00013051 NA other downstream 3005506 18258089 ~ 18264843 (-)
AMCG00013112 myhb,LOC106527115,LOC107667337,LOC107721187,LOC108440470 other upstream 21431 21300093 ~ 21311306 (-)
G42371 myhc4,LOC108412647,LOC107723326,LOC108415768,LOC105910910 other upstream 57555 21336217 ~ 21517177 (-)
G42381 LOC102793686,LOC103366176,LOC105910910 other upstream 58405 21337067 ~ 21375763 (-)
G42375 LOC108261476,LOC105030495,LOC108261437,LOC108254801,LOC108254800,LOC108417520 other upstream 71998 21350660 ~ 21360107 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other upstream 133277 21411939 ~ 21422118 (-)

Expression


Co-expression Network