AMCG00013124 (LOC103370545,LOC102292730,LOC777984,LOC100705928,LOC102793686,LOC100710639,LOC101481850,LOC102288653)


Basic Information

Item Value
gene id AMCG00013124
gene name LOC103370545,LOC102292730,LOC777984,LOC100705928,LOC102793686,LOC100710639,LOC101481850,LOC102288653
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21421622 ~ 21448718 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013124
ATGTCAGATTGTGAATTTACCCTGGACTCCAGTTTCTGGAGCTGCTTCTTTCCACCCTTCATTGCCAGCTGCTCAGCCTCATCCAGACGGTGCTGCAGGTCCTTCACTGTGACCTCCAGGTTCTTCTTCATTCTCTCCAGTACGGACGCGGAGATGGCCGTTTTTGGCCCAGCTGCCATATACCTGAGGAAGCCTGAGAAGGAGAGGATTGAGGCTCAGAACAAACCATTTGATGCCAAATCTGCCGTCTATGTAACTGATGCAAAGGAGCTGTACGTCAAAGGTGTGGTCCAAAGTAGGGAAGGGGGCAAAGCTACTGTCAAGACTGAGGCTGGCCAAACTGTCACAGTCAAGGAGGATGACGTCTTCCCAATGAATCCTCCCAAGTACGACAAAATTGAGGACATGGCGATGATGACCCACCTGAATGAAGCCTCTGTGCTGTATAACCTCAAAGAGCGTTACGCAGCATGGATGATTTACACCTACTCGGGGCTGTTTTGTGCAACTGTGAACCCCTACAAGTGGCTCCCAGTTATTTTGCCCTCAGTGGAGAATCTGGGGCTGGAAACGTGTCATCCAGTACTGTCTAGGGAAAAGAAGAAGGATGCACAGCCTGGGAAACCTGGAGGATCAAATCATCTCACCGACCCTCTGCTGGAGGCTTTCGATAACGAAAAGACAATGAGAAATGACAACTCTAGCTTTGTAAACTTGCTGGAGAAGTTCATGGTAACATTCCAGCTTCCTGATGAAACGAGCTACCATATCTTCTACCAAGATCATtggTGGACACAATTTAACATTCAACTTCCTGGGGTTGGTGTCAAGCAGCATAGAGAAACGGTCTCATTGCCCCAGGGACCTTCGCAAGGATCCGGTGGTGAATCTGGTGCTGGAAAGACTGTGAATACGAAACGTGTCATCCAGTACTTTGCCACAATTGCAGTGTCTGGGGACAAGAAGAAGGAGGCACCAGCAGCTGGCAAAATGCAGGGAACCCTGGAGGATCAAATCATCTCAGCTAACCCTCTGCTGGAGGCTTTCGGTAATGCCAAGACTGTGAGGAATGACAACTCCTCTCGCTTTGGTAAATTCATCAGAATTCATTTTGGAACCACAGGAAAACTGGCTTCTGCTGACATTGAGACTTACTTGCTGGAGAAGTCCAGAGTAACATTCCAGCTGTCTGATGAAAGGAGCTACCACATCTTTTATCAGATCATGACCAACCACAAGCCTGAGCTCATTGACATGCTTCTGATCACAACCAACCCCTATGATTACCCTATGATCAGCCAGGGTCAGATCACTGTGGCCAGCATTGATGACAAAGAGGAGCTGGTTGCCACAGATACTGCCATTGACATTCTGGGCTTCACTAATGAAGAGAAAATGGGCATCTACAAGCTGACTGGTGCTGTGATGCACTACGGTAACATGAAGTTCAAGCAGAAGCAACGTGAGGAGCAGGCAGAACCTGACGGCACAGAGGTTGGTGCCCTGTCCAAATCAGTCTATGAGAAATTGTTCTTGTGGATGGTTGTCCGCATTAACCAGATGTTGGACACCAAGCAGCCCAGACAGTTCTTCATTGGGGTGCTGGATATTGCTGGATTTGAGATCTTCGAtgtaaAGGCAAGTGGTGGAAAGAAAGGTGGCAAGAAGAAGGGTGGCTCTTTCCAGACTGTGTCCGCACTCTTCAGGGAGAACTTGGGCAAGCTGATGACCAACTTGAGAAGCACACATCCTCACTTTGTGCGCTGCTTGATTCCCAATGAATCAAAGACGCCAGGTACTGTCTACATGCTTCACGGTCTCAAGATGATCCAGAGCCTCTTCATAGGAGTTCTTCATCTTGAAAAGTTCAGTGCTGAGAGAGCGAGCCTCTTTCTGAGCCGCCTCCAGCTCTGCCTGGCCCTCCTCAAACTTCTGCTTCCATTCTGCGAGAACCTGTTATCATATTTTATAAAGGCATGCAAGATTTGA

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like

GO:

id name namespace
GO:0014823 response to activity biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013124 True 1989 mRNA 0.48 19 21421622 21448718

Neighbor

gene id symbol gene type direction distance location
AMCG00013119 LOC106565367,LOC777984 coding upstream 21310 21399406 ~ 21400312 (+)
AMCG00013128 LOC106597527,LOC106569817,LOC106606262,LOC106596646,LOC106585883,LOC106596400 coding upstream 58709 21362315 ~ 21362913 (+)
AMCG00013121 NA coding upstream 61915 21350662 ~ 21359707 (+)
AMCG00013123 NA coding upstream 76559 21343864 ~ 21345063 (+)
AMCG00013122 LOC108261602,LOC108254796 coding upstream 77895 21341010 ~ 21343727 (+)
AMCG00013120 myhz1.2,myhz1.1,myhc4 coding downstream 26900 21475618 ~ 21481280 (+)
AMCG00013140 wu:fd14a01 coding downstream 27542 21476260 ~ 21481280 (+)
AMCG00013142 LOC108412647 coding downstream 37513 21486231 ~ 21486678 (+)
AMCG00013125 LOC108412647 coding downstream 37513 21486231 ~ 21486693 (+)
AMCG00013127 NA coding downstream 96901 21545619 ~ 21547056 (+)
G42331 LOC100710639,LOC102784652,LOC102295130,LOC102192639,LOC101477534,LOC108412652 non-coding upstream 9633 21364104 ~ 21411989 (+)
G42330 LOC106589491,LOC105023009,LOC103368359,LOC100710639,LOC102784652,LOC102295130 non-coding upstream 117409 21256585 ~ 21304213 (+)
G42277 NA non-coding upstream 531290 20889675 ~ 20890332 (+)
G42269 NA non-coding upstream 581062 20839589 ~ 20840560 (+)
G42177 NA non-coding upstream 794288 20627094 ~ 20627334 (+)
G42345 LOC777982,LOC104957706 non-coding downstream 23998 21472716 ~ 21508824 (+)
G42347 NA non-coding downstream 50255 21498973 ~ 21503924 (+)
G42350 NA non-coding downstream 80063 21528781 ~ 21600968 (+)
G42448 NA non-coding downstream 699576 22148294 ~ 22148513 (+)
G42449 NA non-coding downstream 700867 22149585 ~ 22149787 (+)
AMCG00013126 myhb,LOC108443910 other upstream 306 21370843 ~ 21421316 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other upstream 142894 21269675 ~ 21278728 (+)
G41978 NA other upstream 2392344 19025561 ~ 19029278 (+)
AMCG00013068 NA other upstream 2447260 18967429 ~ 18974362 (+)
AMCG00013047 NA other upstream 3191384 18158842 ~ 18230238 (+)
G42453 NA other downstream 793711 22242429 ~ 22245790 (+)
AMCG00013147 NA other downstream 799779 22248497 ~ 22260816 (+)
AMCG00013198 NA other downstream 2792551 24241269 ~ 24331854 (+)
G42846 NA other downstream 3298774 24747492 ~ 24749395 (+)
G42858 NA other downstream 3319706 24768424 ~ 24770148 (+)

Expression


Co-expression Network