AMCG00013126 (myhb,LOC108443910)


Basic Information

Item Value
gene id AMCG00013126
gene name myhb,LOC108443910
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21370843 ~ 21421316 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013126
ATGTGTCCTCTTGTCACAACACAGGAGAACTTGGGCAAGCTGATGAGCAACTTGAGGAGCACACATCCTCACTTTGTGCGCTGCTTGATTCCCAATGAATCAAAGACACCAGGTACTGTCAACATCCAACATATTTCATACCTGAGTACACTGTTATACAAAGTATTGAATGCCAGTGCCATTCCAGAGGGTCAGTTCATTGACAGCAAGAAATGTTCAGAGAAGCTCTTGGGATCCATTGATGTAGACCACACCCAGTATAAATTTGGACACACTAAGgtgttttttaaagctgGTCTGCTGGGTACCCTTGAGGAGATGCGAGATGAAAAACTGGCCGCGCTCATCACTAACACGCAGGCTCTTTGCCGTGGCTTCGTCATGAGAAAGGAATTTGTGAAGATGATGGAAAGGAGCTTCCTCAGCCTGTCTCTTGTAAGCCTTCACTTTGAGCTGCAGCTTGTCAACCAGATCCTGGAGTCTGTTCACATTCTTCTTGTCCTCCTCAGCCTGCAGAGACAACAGATGACACATACTTAA
>TU52756
CTTCAGGACCTCCATGGCTAGCATACAGAAGAGCCAGCAGTTTGACAGAGGATTTCTGGTACAGCCCCACCACAGTGTCCTTCAGGTCCTCCATGGCTGGCATACAGAAGAGCCAGCAGTTTGACAGAGGATTTCTGGTACAGCCCCACGACAGTGTCATTCAGGGGGTCCTTGTTCTTGTCCAGCCATCCAGTGATGTTGTAATCCACAGTGCCGGCATAGTGCACCAGGGAGAAGTGGGCCTCTGGCTTGCCTTTGGCAGGCTTGGGTTTCTGGAAGCAGTTGGTTTTCCCAAGATGTTGGTCATAGAGCTTGTTCTTGAAGGTTATGTCTGATGCCTTGGGGAACATGCACTCCTCTTCAAGGATGGAGAAGATGCCCANNNTCTTGGGAAAACCAACTGCTTCCAGAAACCCAAGCCTGCAAAAGGCAAGGCTGAAGCCCACTTCTCCCTGGTGCACTATGCCGGCACTGTGGACTACAACATCACTGGATGGCTGGACAAAAACAAGGACCCCCTGAATGACACTGTGGTGGGGCTGTACCAGAAATCCTCTGTCAAACTGCTGGCTCTTCTGTATGCCAGCCATGGAGGACCTGAAGagagTGGTGGTGGAAAGAAGGGTGGCAAGAAGAAGGGTGGCTCCTTTCAGACGGTGTCTTGTCTATTCAggGAGAACTTGGGCAAGCTGATGAGCAACTTGAGGAGCACACATCCTCACTTTGTGCGCTGCTTGATTCCCAATGAATCAAAGACACCAGgtcTCATGGAAAACTTCCTGGTTATCCACCAGTTGAGGTGCAATGGTGTGCTAGAAGGTATCAGGATTTGCAGGAAAGGTTTCCCAAGCAGAATTCTCTATGGAGACTTCAAGCAAAGATACAAAGTATTGAATGCCAGTGCCATTCCAGAGGGTCAGTTCATTGACAGCAAGAAATGTTCAGAGAAGCTCTTGGGATCCATTGATGTAGACCACACCCAGTATAAATTTGGACACACTAAGgtgttttttaaagctgGTCTGCTGGGTACCCTTGAGGAGATGCGAGATGAAAAACTGGCCGCGCTCATCACTAACACGCAGGCTCTTTGCCGTGGCTTCGTCATGAGAAAGGAATTTGTGAAGATGATGGAAAGGAGAGAATCCATCTTCTCCATCCAATACAACATCCGCTCATTCATGAATGTGNNN

Function

symbol description
myhb Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Human ortholog(s) of this gene implicated in arthrogryposis multiplex congenita; disease of cellular proliferation; and muscle tissue disease (multiple). Orthologous to several human genes including MYH1 (myosin heavy chain 1) and MYH4 (myosin heavy chain 4).

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013126 False 540 mRNA 0.46 4 21416485 21421316
TU52756 True 1193 TUCP 0.49 9 21370843 21418787

Neighbor

gene id symbol gene type direction distance location
AMCG00013128 LOC106597527,LOC106569817,LOC106606262,LOC106596646,LOC106585883,LOC106596400 coding upstream 7930 21362315 ~ 21362913 (+)
AMCG00013121 NA coding upstream 11136 21350662 ~ 21359707 (+)
AMCG00013123 NA coding upstream 25780 21343864 ~ 21345063 (+)
AMCG00013122 LOC108261602,LOC108254796 coding upstream 27116 21341010 ~ 21343727 (+)
AMCG00013108 NA coding upstream 85005 21270056 ~ 21285838 (+)
AMCG00013124 LOC103370545,LOC102292730,LOC777984,LOC100705928,LOC102793686,LOC100710639,LOC101481850,LOC102288653 coding downstream 306 21421622 ~ 21448718 (+)
AMCG00013120 myhz1.2,myhz1.1,myhc4 coding downstream 54302 21475618 ~ 21481280 (+)
AMCG00013140 wu:fd14a01 coding downstream 54944 21476260 ~ 21481280 (+)
AMCG00013142 LOC108412647 coding downstream 64915 21486231 ~ 21486678 (+)
AMCG00013125 LOC108412647 coding downstream 64915 21486231 ~ 21486693 (+)
G42330 LOC106589491,LOC105023009,LOC103368359,LOC100710639,LOC102784652,LOC102295130 non-coding upstream 66630 21256585 ~ 21304213 (+)
G42277 NA non-coding upstream 480511 20889675 ~ 20890332 (+)
G42269 NA non-coding upstream 530283 20839589 ~ 20840560 (+)
G42177 NA non-coding upstream 743509 20627094 ~ 20627334 (+)
G42172 NA non-coding upstream 819026 20551260 ~ 20551817 (+)
G42345 LOC777982,LOC104957706 non-coding downstream 51400 21472716 ~ 21508824 (+)
G42347 NA non-coding downstream 77657 21498973 ~ 21503924 (+)
G42350 NA non-coding downstream 107465 21528781 ~ 21600968 (+)
G42448 NA non-coding downstream 726978 22148294 ~ 22148513 (+)
G42449 NA non-coding downstream 728269 22149585 ~ 22149787 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other upstream 92115 21269675 ~ 21278728 (+)
G41978 NA other upstream 2341565 19025561 ~ 19029278 (+)
AMCG00013068 NA other upstream 2396481 18967429 ~ 18974362 (+)
AMCG00013047 NA other upstream 3140605 18158842 ~ 18230238 (+)
AMCG00013015 NA other upstream 4641310 16719355 ~ 16729533 (+)
G42344 LOC108412647 other downstream 5344 21426660 ~ 21486808 (+)
G42453 NA other downstream 821113 22242429 ~ 22245790 (+)
AMCG00013147 NA other downstream 827181 22248497 ~ 22260816 (+)
AMCG00013198 NA other downstream 2819953 24241269 ~ 24331854 (+)
G42846 NA other downstream 3326176 24747492 ~ 24749395 (+)

Expression


Co-expression Network