AMCG00013127


Basic Information

Item Value
gene id AMCG00013127
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21545619 ~ 21547056 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013127
GTGGTGGGCCACAAGTGGGAGATTCACAGACAACCTAGGGACAAAAATGGATGACAATATACAGcctttgtttacatttggaGTCATTGCAGATATTCAGTATGCAGACATTGAAGATGGCTTTAACTTCCTGCATACGAGGAAACGATACTACAGGAACAGTCTTAGTTTACTGCGCAGAGCTAATGAAAAATGGAGTAGAGAGGCAGTCCAGCCCATCTTTATTCTGCAGCTGGGAGACATCATTGATGGGTTCAACAAGCAGCACAATGCATCAGAAAAGGCCCTTGAGACTATCATAAATGAGCTGGAAAAAAGCAATGCCAAAATACACCATATATGGGGCAACCATGAATTTTATAACTTCAGTCGGGAAGATCTGATGAATTCTGTGCTTTACAGCAAAATCTCAGAAAGTGACCTAGATGAGGTCATTGTGGAAAATGGCATTGAGCTGAGTTATTCGTATCATTTCAGCCCTGTTCCTAAATTCCGCTTTGTGTTGCTCGATGCATATGATCTGAGCCTTCTTGGAAGAAAAGAACCAAGTGAAAAGTATTACCAGTCACTGAAAATTATACAAGAGcacaacagaaatgaaaatctTAACCATCCACCAGGACATGCAGGGATGGAACGGCGTTTTGTTCAGTTCAATGGTGGATTCAGTAAAGCTCAGCTTGAGTGGTTGGATAAAGTACTTACCTTCTCTGACAATAACCTTGAAAGAGTCACAGTTATTAGTCATCTGCCCATACATCCACACTCCACAGATCCTGTCTGTCTGGCCTGGAATTATGATGAAGTACTTTCAATattgcattcacacaggagTGTTGTGTGCTTCATGGCGGGACACGACCATGACGGCGGCTACTTCCTCGATGAATGTGGGGTGCATCACCTCACTTTTGAAGGGGTGATTGAAACCCCACCTGATAGTGATGCATTTGGCACGGTGTACGTATATGAAGACAGGATGATTCTTAAGGGCAAAGGAAGGGTTTCAGACAGAGTCCTTCTGTATCCA

Function

GO: NA

KEGG:

id description
K01517 ADPRM; manganese-dependent ADP-ribose/CDP-alcohol diphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013127 True 1030 mRNA 0.43 3 21545619 21547056

Neighbor

gene id symbol gene type direction distance location
AMCG00013125 LOC108412647 coding upstream 58926 21486231 ~ 21486693 (+)
AMCG00013142 LOC108412647 coding upstream 58941 21486231 ~ 21486678 (+)
AMCG00013120 myhz1.2,myhz1.1,myhc4 coding upstream 64339 21475618 ~ 21481280 (+)
AMCG00013140 wu:fd14a01 coding upstream 64339 21476260 ~ 21481280 (+)
AMCG00013124 LOC103370545,LOC102292730,LOC777984,LOC100705928,LOC102793686,LOC100710639,LOC101481850,LOC102288653 coding upstream 96901 21421622 ~ 21448718 (+)
AMCG00013129 LOC107756562,LOC108433489,LOC107570719,LOC107695698 coding downstream 4116 21551172 ~ 21585017 (+)
AMCG00013146 dnah9 coding downstream 226186 21773242 ~ 21911741 (+)
AMCG00013148 NA coding downstream 382999 21930055 ~ 22228496 (+)
AMCG00013149 foxk2,LOC107719587,LOC106601484 coding downstream 729286 22276342 ~ 22292501 (+)
AMCG00013152 NA coding downstream 832179 22379235 ~ 22470187 (+)
G42345 LOC777982,LOC104957706 non-coding upstream 36795 21472716 ~ 21508824 (+)
G42347 NA non-coding upstream 41695 21498973 ~ 21503924 (+)
G42331 LOC100710639,LOC102784652,LOC102295130,LOC102192639,LOC101477534,LOC108412652 non-coding upstream 133630 21364104 ~ 21411989 (+)
G42330 LOC106589491,LOC105023009,LOC103368359,LOC100710639,LOC102784652,LOC102295130 non-coding upstream 241406 21256585 ~ 21304213 (+)
G42277 NA non-coding upstream 655287 20889675 ~ 20890332 (+)
G42448 NA non-coding downstream 601238 22148294 ~ 22148513 (+)
G42449 NA non-coding downstream 602529 22149585 ~ 22149787 (+)
G42459 NA non-coding downstream 719301 22266357 ~ 22266636 (+)
G42464 wdr45b non-coding downstream 753517 22300573 ~ 22304742 (+)
G42488 NA non-coding downstream 967808 22514864 ~ 22570081 (+)
G42344 LOC108412647 other upstream 58811 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 74059 21286031 ~ 21471560 (+)
AMCG00013126 myhb,LOC108443910 other upstream 124303 21370843 ~ 21421316 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other upstream 266891 21269675 ~ 21278728 (+)
G41978 NA other upstream 2516341 19025561 ~ 19029278 (+)
G42453 NA other downstream 695373 22242429 ~ 22245790 (+)
AMCG00013147 NA other downstream 701441 22248497 ~ 22260816 (+)
AMCG00013198 NA other downstream 2694213 24241269 ~ 24331854 (+)
G42846 NA other downstream 3200436 24747492 ~ 24749395 (+)
G42858 NA other downstream 3221368 24768424 ~ 24770148 (+)

Expression


Co-expression Network