AMCG00013131 (LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241)


Basic Information

Item Value
gene id AMCG00013131
gene name LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21448329 ~ 21449954 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013131
ATGGAGTCTGTAGCCAAGTCTAAGGCTAATCTGGAGAAGATGTGCCGTACTCTGGAGGACCAACTCAGTGAACTCAAGGCTAAGAGTGATGAGAACTCACGCCAGATTAATGACCTCAGTGGTCAAAAAGCACGTCTGCAAACTGAGAATGGTGAATTTGGACGCCAGCTGGAAGAGAAAGAAGCTCTCGTATCCCAGCTAACAAGAGGAAAGCAGGCCTACACTCAACAAATTGAAGAGTTGAAGAGGCAAATGGAAGAGGAAACAAAGgccAAGAATGCTCTGGCTCATGGTTTACAATCAGCCCGCCATGACTGTGACCTGCTCCGGGAGCAATatgaggaggagcaggaggccaAGGCTGAGCTTCAGCGTGGAATGTCCAAGGCCAATAGTGAAGTGGCTCAGTGGAGAACAAAATACGAAACTGACGCCATCCAGCGCACTGAGGAGCTTGAGGAAGCCAAGAAAAAGCTTGCCCAGCGCCTGCAAGATGCAGAGGAACAAATTGAGGCTGTGAACTCCAAGTGCGCCTCTCTGGAAAAGACCAAGCAGAGGTTGCAGGGTGAGGTGGAAGACCTCATGATTGATGTGGAGAGAGCAAATGCCCAGGCTGCCAACCTTGACAAGAAGCAGAGGAACTTTGACAAGGTTCTCGCAGAATGGAAGCAGAAGTTTGAGGAGGGCCAGGCAGAGCTGGAGGCGGCTCAGAAAGAGGCTCGCTCTCTCAGCACTGAACTTTTCAAGATGAAGAACTCCTATGAAGAGGCTCTGGATCATCTTGAGACCCTTAAACGAGAGAATAAGAACTTGCAGCAGGAGATCTCAGACCTCACTGAACAGATT
>TU52822
gccAAGAATGCTCTGGCTCATGGTTTACAATCAGCCCGCCATGACTGTGACCTGCTCCGGGAGCAATatgaggaggagcaggaggccaAGGCTGAGCTTCAGCGTGGAATGTCCAAGGCCAATAGTGAAGTGGCTCAGTGGAGAACAAAATACGAAACTGACGCCATCCAGCGCACTGAGGAGCTTGAGGAAGCCAAGAAAAAGCTTGCCCAGCGCCTGCAAGATGCAGAGGAACAAATTGAGGCTGTGAACTCCAAGTGCGCCTCTCTGGAAAAGACCAAGCAGAGGTTGCAG

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like, partial

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013131 True 846 mRNA 0.50 7 21448329 21449954
TU52822 False 294 lncRNA 0.54 2 21448892 21449281

Neighbor

gene id symbol gene type direction distance location
AMCG00013138 LOC103399676,LOC107571695 coding downstream 50074 21394276 ~ 21398255 (-)
AMCG00013115 LOC108412647,LOC100705928,LOC102793686,LOC105910910 coding downstream 73165 21351263 ~ 21375164 (-)
AMCG00013116 ns:zf-e68,LOC106569812,LOC108254801,LOC108261476,LOC108261437,LOC106569813 coding downstream 97515 21350459 ~ 21350814 (-)
AMCG00013110 LOC100705928,LOC102793686,LOC101481850,LOC100710639,LOC102197206,LOC102288653,LOC106589491 coding downstream 110246 21336157 ~ 21338083 (-)
AMCG00013113 myhz1.1,ns:zf-e68,myhz1.2,LOC108444092,LOC105902796,LOC108254796,LOC108443910,LOC103370565 coding downstream 113198 21328200 ~ 21335131 (-)
AMCG00013136 LOC107571695,LOC108418072 coding upstream 2078 21452032 ~ 21454895 (-)
AMCG00013132 myhz1.1,ns:zf-e68,myhz1.2,myhz2,myhc4 coding upstream 19075 21469029 ~ 21474368 (-)
AMCG00013134 LOC105910910,LOC107723326,LOC103366176,LOC108412647,LOC100705928 coding upstream 38327 21488281 ~ 21492981 (-)
AMCG00013139 NA coding upstream 77319 21527273 ~ 21529046 (-)
AMCG00013143 NA coding upstream 79459 21529413 ~ 21531624 (-)
G42382 NA non-coding downstream 20613 21340970 ~ 21427716 (-)
G42386 NA non-coding downstream 48171 21399644 ~ 21400158 (-)
G42383 NA non-coding downstream 101495 21346475 ~ 21346834 (-)
G42372 LOC105910910,LOC103366176,LOC777984,LOC100705928 non-coding downstream 137981 21287320 ~ 21310348 (-)
G42378 LOC106596905,LOC106577420,LOC106569812 non-coding downstream 238680 21209265 ~ 21209649 (-)
G42440 dnah9 non-coding upstream 443670 21893624 ~ 21905597 (-)
G42450 NA non-coding upstream 699627 22149581 ~ 22149792 (-)
G42544 NA non-coding upstream 1124604 22574558 ~ 22574827 (-)
G42553 NA non-coding upstream 1256112 22706066 ~ 22706337 (-)
G42557 NA non-coding upstream 1366202 22816156 ~ 22816369 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other downstream 26211 21411939 ~ 21422118 (-)
G42381 LOC102793686,LOC103366176,LOC105910910 other downstream 72566 21337067 ~ 21375763 (-)
G42375 LOC108261476,LOC105030495,LOC108261437,LOC108254801,LOC108254800,LOC108417520 other downstream 88222 21350660 ~ 21360107 (-)
AMCG00013112 myhb,LOC106527115,LOC107667337,LOC107721187,LOC108440470 other downstream 137023 21300093 ~ 21311306 (-)
G42366 myhz2,LOC106598369,LOC104955241 other downstream 146908 21252107 ~ 21301421 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other upstream 53895 21503849 ~ 21526832 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other upstream 2376655 23826609 ~ 23839146 (-)
G42749 NA other upstream 2394129 23844083 ~ 23847477 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 3429687 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 3575784 25025738 ~ 25029004 (-)

Expression


Co-expression Network