AMCG00013134 (LOC105910910,LOC107723326,LOC103366176,LOC108412647,LOC100705928)


Basic Information

Item Value
gene id AMCG00013134
gene name LOC105910910,LOC107723326,LOC103366176,LOC108412647,LOC100705928
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21488281 ~ 21492981 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013134
GGAGAATCTGGTGCTGGAAAGACTGTGAACACGAAACGTGTTATCCAGTACTTTGCAACAATCGCAGTGTCTGCAGACAAGAAGAAGGAGGCACAGCCTGGCAAAATGCAGGGAACCCTGGAGGATCAAATCATCTCAGCTAACCCTCTGCTGGAGGCTTTCGGTAACGCCAAGACAGTGAGGAATGACAACTCCTCTCGCTTTGGTAAATTCATCAGAATTCACTTTGGAACCACAGGAAAACTGGCATCTGCTGACATTGAGACTTATTTGCTGGAGAAGTCCAGAGTAACATTCCAGCTGTCTGATGAAAGGAGCTACCACATCTTTTATCAGATCATGACCAACCACAAGCCTGAGCTCATTGACATGCTTCTGATCACAACCAATCCCTATGATTTCCCTATGATCAGCCAGGGTCAGATCACTGTGGCCAGCATTGATGACAAAGAGGAGCTGGTTGCCACAGATACTGCCATTGATATTCTGGGCTTTAATAATGATGAGAAATTGGGCATCTACAAGCTGACTGGTGCAGTGATGCACTACGGTAACATGAAGTTCAAGCAGAAACAGCGTGAGGAGCAGGCAGAACCTGACGGCACAGAGGTTGGTGCCCTGTCTAAATCAGTGTATGAGAAATTATTCTTGTGGATGGTCATCCGCATTAACCAGATGTTGGACACCAAGCAGCCCAGACAGTTCTTCATTGGGGTGCTGGATATTGCTGGGTTTGAGATCTTCGATGTAAAATCTGGTGCTGGAAAGACTGTGAACACGAAACGTGTCATCCAGTACTTTGCAACAATCGCAGTGTCTGCAGACAAGAAGAAGGAGGCACAGCCTGGCAAAATACAGGGAACCCTGGAGGATCAAATCATCTCAGCTAACCCTCTGCTGGAGGCTTTTGGTAACGCCAAGACAGTGAGGAATGACAACTCCTCTCGTTTTGGTAAATTCATCAGAATTCACTTTGGAACCACAGGAAAACTGGCTTCTGCTGACATTGAGACTTACTTGCTGGAGAAGTCCAGAGTAACATTCCAGCTGTCTGATGAAAGGAGCTACCACATCTTTTATCAGATCATGACCAACCACAAGCCTGAGCTCATTGACATGCTTCTGATCACAACCAACCCCTATGATTTCCCTATGATCAGCCAGGGTCAGATCACTGTGGCCAGCATTGATGACAAAGAGGAGCTGGTTGCCACAGATACTGCCATTGATATTCTGGGCTTTAATAATGATGAGAAATTGGGCATCTACAAGCTGACTGGTGCTGTGATGCACTACGGTAACATGAAGTTCAAGCAGAAGCAACGTGAGGAGCAGGCAGAACCTGACGGCACAGAGGGTAAACTTCAGATTTACAAGTTACTTTATTATAACATATGGGATTTCTCACTACAA

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like

GO:

id name namespace
GO:0001757 somite specification biological_process
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013134 True 1413 mRNA 0.46 13 21488281 21492981

Neighbor

gene id symbol gene type direction distance location
AMCG00013132 myhz1.1,ns:zf-e68,myhz1.2,myhz2,myhc4 coding downstream 13913 21469029 ~ 21474368 (-)
AMCG00013136 LOC107571695,LOC108418072 coding downstream 33386 21452032 ~ 21454895 (-)
AMCG00013138 LOC103399676,LOC107571695 coding downstream 90026 21394276 ~ 21398255 (-)
AMCG00013115 LOC108412647,LOC100705928,LOC102793686,LOC105910910 coding downstream 113117 21351263 ~ 21375164 (-)
AMCG00013116 ns:zf-e68,LOC106569812,LOC108254801,LOC108261476,LOC108261437,LOC106569813 coding downstream 137467 21350459 ~ 21350814 (-)
AMCG00013139 NA coding upstream 34292 21527273 ~ 21529046 (-)
AMCG00013143 NA coding upstream 36432 21529413 ~ 21531624 (-)
AMCG00013135 LOC107091756,LOC107691241,LOC106606941,LOC106601503,LOC105910937,LOC107559522 coding upstream 48452 21541433 ~ 21544389 (-)
AMCG00013141 NA coding upstream 53059 21546040 ~ 21549726 (-)
AMCG00013130 NA coding upstream 103094 21596075 ~ 21627396 (-)
G42382 NA non-coding downstream 60565 21340970 ~ 21427716 (-)
G42386 NA non-coding downstream 88123 21399644 ~ 21400158 (-)
G42383 NA non-coding downstream 141447 21346475 ~ 21346834 (-)
G42372 LOC105910910,LOC103366176,LOC777984,LOC100705928 non-coding downstream 177933 21287320 ~ 21310348 (-)
G42378 LOC106596905,LOC106577420,LOC106569812 non-coding downstream 278632 21209265 ~ 21209649 (-)
G42440 dnah9 non-coding upstream 400643 21893624 ~ 21905597 (-)
G42450 NA non-coding upstream 656600 22149581 ~ 22149792 (-)
G42544 NA non-coding upstream 1081577 22574558 ~ 22574827 (-)
G42553 NA non-coding upstream 1213085 22706066 ~ 22706337 (-)
G42557 NA non-coding upstream 1323175 22816156 ~ 22816369 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other downstream 38327 21448329 ~ 21449954 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other downstream 66163 21411939 ~ 21422118 (-)
G42381 LOC102793686,LOC103366176,LOC105910910 other downstream 112518 21337067 ~ 21375763 (-)
G42375 LOC108261476,LOC105030495,LOC108261437,LOC108254801,LOC108254800,LOC108417520 other downstream 128174 21350660 ~ 21360107 (-)
AMCG00013112 myhb,LOC106527115,LOC107667337,LOC107721187,LOC108440470 other downstream 176975 21300093 ~ 21311306 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other upstream 10868 21503849 ~ 21526832 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other upstream 2333628 23826609 ~ 23839146 (-)
G42749 NA other upstream 2351102 23844083 ~ 23847477 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 3386660 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 3532757 25025738 ~ 25029004 (-)

Expression


Co-expression Network