AMCG00013139


Basic Information

Item Value
gene id AMCG00013139
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21527273 ~ 21529046 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013139
ATGGGAGtcatttcaaaagcagtttATGAGAAACTGTTTTTCTGGATGGTGGCAAGGATCAACCAACAGTTTGATACAAAACTTCCCCATCAGCATTTAATTGGGGTTCTGGACACTGCTGGGTTTGAAATGTTTGATGTGAGCCTAGAAGCCAAAATCCAACATGTTCAGCtggaaataaatgaaacacaatCAAGAATTGATGAAAAGATAGCCGACAAAGAAGAGGAGATTGGTCTGCTGAAAACGAATCATCAGATGATCCTGGACCGGACGCAGAACTCCCTGGATGCTGAGAATGATGCGCTGAGACTGAAGAAGAAGATGGAGGGTGACCTGAATGACATGGAGATCCAGCTGAACCACGCACAACAGCAGGCTTCGGAAGCACAAAATCACCTTCATAAAGTGCAAGCTCAGCTCAAAATGTGTTACCTCTGTCTTCACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013139 True 450 mRNA 0.44 2 21527273 21529046

Neighbor

gene id symbol gene type direction distance location
AMCG00013134 LOC105910910,LOC107723326,LOC103366176,LOC108412647,LOC100705928 coding downstream 34292 21488281 ~ 21492981 (-)
AMCG00013132 myhz1.1,ns:zf-e68,myhz1.2,myhz2,myhc4 coding downstream 52905 21469029 ~ 21474368 (-)
AMCG00013136 LOC107571695,LOC108418072 coding downstream 72378 21452032 ~ 21454895 (-)
AMCG00013138 LOC103399676,LOC107571695 coding downstream 129018 21394276 ~ 21398255 (-)
AMCG00013115 LOC108412647,LOC100705928,LOC102793686,LOC105910910 coding downstream 152109 21351263 ~ 21375164 (-)
AMCG00013143 NA coding upstream 367 21529413 ~ 21531624 (-)
AMCG00013135 LOC107091756,LOC107691241,LOC106606941,LOC106601503,LOC105910937,LOC107559522 coding upstream 12387 21541433 ~ 21544389 (-)
AMCG00013141 NA coding upstream 16994 21546040 ~ 21549726 (-)
AMCG00013130 NA coding upstream 67029 21596075 ~ 21627396 (-)
AMCG00013144 NA coding upstream 395556 21924602 ~ 21935718 (-)
G42382 NA non-coding downstream 99557 21340970 ~ 21427716 (-)
G42386 NA non-coding downstream 127115 21399644 ~ 21400158 (-)
G42383 NA non-coding downstream 180439 21346475 ~ 21346834 (-)
G42372 LOC105910910,LOC103366176,LOC777984,LOC100705928 non-coding downstream 216925 21287320 ~ 21310348 (-)
G42378 LOC106596905,LOC106577420,LOC106569812 non-coding downstream 317624 21209265 ~ 21209649 (-)
G42440 dnah9 non-coding upstream 364578 21893624 ~ 21905597 (-)
G42450 NA non-coding upstream 620535 22149581 ~ 22149792 (-)
G42544 NA non-coding upstream 1045512 22574558 ~ 22574827 (-)
G42553 NA non-coding upstream 1177020 22706066 ~ 22706337 (-)
G42557 NA non-coding upstream 1287110 22816156 ~ 22816369 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other downstream 441 21503849 ~ 21526832 (-)
G42371 myhc4,LOC108412647,LOC107723326,LOC108415768,LOC105910910 other downstream 10096 21336217 ~ 21517177 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other downstream 77319 21448329 ~ 21449954 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other downstream 105155 21411939 ~ 21422118 (-)
G42381 LOC102793686,LOC103366176,LOC105910910 other downstream 151510 21337067 ~ 21375763 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other upstream 2297563 23826609 ~ 23839146 (-)
G42749 NA other upstream 2315037 23844083 ~ 23847477 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 3350595 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 3496692 25025738 ~ 25029004 (-)
G43001 NA other upstream 3546347 25075393 ~ 25078244 (-)

Expression


Co-expression Network