AMCG00013141


Basic Information

Item Value
gene id AMCG00013141
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21546040 ~ 21549726 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013141
GCTGCATATTCCATCCcagcttgtttgtgttttatgataAGTGCTAAACCTCAGATTACAGAGACATTACTTTGGAGAAGACTTTCTGATCTGCATACACTCCTTTGTTCTGCTGTAGCTGGCATTTTGGGGTGGTCTCTGTACAAAAGCAGTACCAAGGATGTCCTTCAGAAAGAAGAAGGAAGAGTTCTCTGGATTACTATTGATAACTGTGTGGCTGCTCCTGTGTCGTCATTCAGGGAGGAATCCCATTGGAGGATTGAGACTTTACACAGCGATAAGCATCACAGTATTCCCATTTATGACATGGCTGTACTACTACATCAACAAGGAACTGAGGACCTCTTGGCCATCACATTatccCCCCTAAGGTGGGGTTTCAATCACCCCTTCAAAAGTGAGGTGATGCACCCCACATTCATCGAGGAAGTAGCCGCCGTCATGGTCGTGTCCCGCCATGAAGCACACAACActcctAAGGCTCAGATCATATGCATCGAGCAACACAAAGCGGAATTTAGGAACAGGGCTGAAATGATACGAATAACTCAGCTCAATGCCATTTTCCACAATGACCTCATCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013141 True 585 mRNA 0.45 7 21546040 21549726

Neighbor

gene id symbol gene type direction distance location
AMCG00013135 LOC107091756,LOC107691241,LOC106606941,LOC106601503,LOC105910937,LOC107559522 coding downstream 1651 21541433 ~ 21544389 (-)
AMCG00013143 NA coding downstream 14416 21529413 ~ 21531624 (-)
AMCG00013139 NA coding downstream 16994 21527273 ~ 21529046 (-)
AMCG00013134 LOC105910910,LOC107723326,LOC103366176,LOC108412647,LOC100705928 coding downstream 53059 21488281 ~ 21492981 (-)
AMCG00013132 myhz1.1,ns:zf-e68,myhz1.2,myhz2,myhc4 coding downstream 71672 21469029 ~ 21474368 (-)
AMCG00013130 NA coding upstream 46349 21596075 ~ 21627396 (-)
AMCG00013144 NA coding upstream 374876 21924602 ~ 21935718 (-)
AMCG00013145 LOC108424875 coding upstream 474250 22023976 ~ 22039234 (-)
AMCG00013150 wdr45b,LOC107598578 coding upstream 743602 22293328 ~ 22312757 (-)
AMCG00013151 LOC108443562,LOC103039554,LOC107702472,LOC107566485,LOC107581578,LOC107722231,LOC107755515 coding upstream 769936 22319662 ~ 22367010 (-)
G42382 NA non-coding downstream 118324 21340970 ~ 21427716 (-)
G42386 NA non-coding downstream 145882 21399644 ~ 21400158 (-)
G42383 NA non-coding downstream 199206 21346475 ~ 21346834 (-)
G42372 LOC105910910,LOC103366176,LOC777984,LOC100705928 non-coding downstream 235692 21287320 ~ 21310348 (-)
G42378 LOC106596905,LOC106577420,LOC106569812 non-coding downstream 336391 21209265 ~ 21209649 (-)
G42440 dnah9 non-coding upstream 343898 21893624 ~ 21905597 (-)
G42450 NA non-coding upstream 599855 22149581 ~ 22149792 (-)
G42544 NA non-coding upstream 1024832 22574558 ~ 22574827 (-)
G42553 NA non-coding upstream 1156340 22706066 ~ 22706337 (-)
G42557 NA non-coding upstream 1266430 22816156 ~ 22816369 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other downstream 19208 21503849 ~ 21526832 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other downstream 96086 21448329 ~ 21449954 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other downstream 123922 21411939 ~ 21422118 (-)
G42381 LOC102793686,LOC103366176,LOC105910910 other downstream 170277 21337067 ~ 21375763 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other upstream 2276883 23826609 ~ 23839146 (-)
G42749 NA other upstream 2294357 23844083 ~ 23847477 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 3329915 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 3476012 25025738 ~ 25029004 (-)
G43001 NA other upstream 3525667 25075393 ~ 25078244 (-)

Expression


Co-expression Network