AMCG00013148


Basic Information

Item Value
gene id AMCG00013148
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21930055 ~ 22228496 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013148
ATGGCCCTCTGCACCCTCCTGGGTCTCTCGCGCTGCGTGCCCTGCTGCTCCTGGCTCATCTTGATGACATGCAGGGGCAGCGTTCCTCTGGCTGCCAGGTCGGGCAGTTGGCAGAATTTGGGAGTAATTTTGCCTGAACAGAAGGTCAGGAAATGGAGGCTCAACAGGAGAGAGATGCTGAGACTCAGAAGGACCCCTGAGATTCGTCTCCCCTGGGAGGTGCTGAGAGACATTGACAAGACCGAGGTGGATAGCTTCCGAAGTGTTCTCCTAGAGACGGAGGAGGAGAAGGGAAAGAAGGGGAGGAAgtggaagaggaagaagaacaCAACCCAAAGCAATCTCTATCTGAATTATGCCACAGTTCCTCCCATTTCTCTTCTGCTACAGACAGGACCAGAAGATGAGCTCTATTTTCCCCCCATCTCTCCTGCAAAAACAATCTGTAGCTATCTGAAAGACCTACTGATTTTGCAATCTCTGAAGGCGAGGGCTGCCAAAGCATCGGGTCAGTGCAGCGATGAGTGCGGCCCCATCAGTCCTTTGCTCCCAGCTCAGGTCTCGCAGTGTCTGCGCGGCAGAGCCCTCCAGAACCGCGGCCAGATTGACGGCCTTCTGTTTGTTGCTCCAGGAATTGGCTTGGGCTACGATCTCAAATTTAATCCCAGTCTGTTGAGCCATCAAAGCACCGGGGTCACCGGTTCTCTCTTCGTCCCCTCCTGTTCCGGTCTGTGCGGATTTATTTCGGTGTACAGCTGCAGACCCCTTGCCCCATCGGCTGGCAGAACCAGGACGGACAAATCAAGTTCACCCTCTGCATCCTTGGTGCAGGGCTTCGAGTCGCACGGAATGGCTTCAGCTGAAATCCGAGTTACTGGTGTTAGTAAATACAGCTATGAGCTCTTATCTTCTAGACTATTTGTCCTGAACAGTGACACTCTGCAGAACTTCAGCAGTTTGGAGAAGCTGTCAGTTAAGAGAACCAACCTCTCCTCCCTTGACACTGATGCGTTCCATTACCTCCCAAGCCTCAGATCACTGATACTGGAAGACGTTAACCTCAGTAACACAGCAATACATCACAACACCTTTGCTGGACTGCAGATTACATCGCTGAGCCTGCGGAATAATCATCTGGATCGAATCGAGCGACACACATTCGCCGGCCTTGTGCCTTTTCAGTTGTTCGATCTGGTGAaactgtgcatttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013148 True 1212 mRNA 0.52 12 21930055 22228496

Neighbor

gene id symbol gene type direction distance location
AMCG00013146 dnah9 coding upstream 18314 21773242 ~ 21911741 (+)
AMCG00013129 LOC107756562,LOC108433489,LOC107570719,LOC107695698 coding upstream 345038 21551172 ~ 21585017 (+)
AMCG00013127 NA coding upstream 382999 21545619 ~ 21547056 (+)
AMCG00013125 LOC108412647 coding upstream 443362 21486231 ~ 21486693 (+)
AMCG00013142 LOC108412647 coding upstream 443377 21486231 ~ 21486678 (+)
AMCG00013149 foxk2,LOC107719587,LOC106601484 coding downstream 47846 22276342 ~ 22292501 (+)
AMCG00013152 NA coding downstream 150739 22379235 ~ 22470187 (+)
AMCG00013154 NA coding downstream 268897 22497393 ~ 22498928 (+)
AMCG00013155 LOC108443565,LOC103481883 coding downstream 284333 22512829 ~ 22514649 (+)
AMCG00013158 NA coding downstream 420680 22649176 ~ 22655621 (+)
G42350 NA non-coding upstream 329087 21528781 ~ 21600968 (+)
G42345 LOC777982,LOC104957706 non-coding upstream 421231 21472716 ~ 21508824 (+)
G42347 NA non-coding upstream 426131 21498973 ~ 21503924 (+)
G42331 LOC100710639,LOC102784652,LOC102295130,LOC102192639,LOC101477534,LOC108412652 non-coding upstream 518066 21364104 ~ 21411989 (+)
G42330 LOC106589491,LOC105023009,LOC103368359,LOC100710639,LOC102784652,LOC102295130 non-coding upstream 625842 21256585 ~ 21304213 (+)
G42459 NA non-coding downstream 37861 22266357 ~ 22266636 (+)
G42464 wdr45b non-coding downstream 72077 22300573 ~ 22304742 (+)
G42488 NA non-coding downstream 286368 22514864 ~ 22570081 (+)
G42518 NA non-coding downstream 463436 22691932 ~ 22692216 (+)
G42554 NA non-coding downstream 633319 22861815 ~ 22862982 (+)
G42344 LOC108412647 other upstream 443247 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 458495 21286031 ~ 21471560 (+)
AMCG00013126 myhb,LOC108443910 other upstream 508739 21370843 ~ 21421316 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other upstream 651327 21269675 ~ 21278728 (+)
G41978 NA other upstream 2900777 19025561 ~ 19029278 (+)
G42453 NA other downstream 13933 22242429 ~ 22245790 (+)
AMCG00013147 NA other downstream 20001 22248497 ~ 22260816 (+)
AMCG00013198 NA other downstream 2012773 24241269 ~ 24331854 (+)
G42846 NA other downstream 2518996 24747492 ~ 24749395 (+)
G42858 NA other downstream 2539928 24768424 ~ 24770148 (+)

Expression


Co-expression Network