Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013154 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 22497393 ~ 22498928 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04727 | GABAergic synapse |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013154 | True | 492 | mRNA | 0.48 | 2 | 22497393 | 22498928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013152 | NA | coding | upstream | 27206 | 22379235 ~ 22470187 (+) |
| AMCG00013149 | foxk2,LOC107719587,LOC106601484 | coding | upstream | 204892 | 22276342 ~ 22292501 (+) |
| AMCG00013148 | NA | coding | upstream | 268897 | 21930055 ~ 22228496 (+) |
| AMCG00013146 | dnah9 | coding | upstream | 585652 | 21773242 ~ 21911741 (+) |
| AMCG00013129 | LOC107756562,LOC108433489,LOC107570719,LOC107695698 | coding | upstream | 912376 | 21551172 ~ 21585017 (+) |
| AMCG00013155 | LOC108443565,LOC103481883 | coding | downstream | 13901 | 22512829 ~ 22514649 (+) |
| AMCG00013158 | NA | coding | downstream | 150248 | 22649176 ~ 22655621 (+) |
| AMCG00013161 | LOC107722232 | coding | downstream | 174274 | 22673202 ~ 22858651 (+) |
| AMCG00013162 | NA | coding | downstream | 382980 | 22881908 ~ 22923730 (+) |
| AMCG00013165 | NA | coding | downstream | 902212 | 23401140 ~ 23410915 (+) |
| G42464 | wdr45b | non-coding | upstream | 192651 | 22300573 ~ 22304742 (+) |
| G42459 | NA | non-coding | upstream | 230757 | 22266357 ~ 22266636 (+) |
| G42449 | NA | non-coding | upstream | 347606 | 22149585 ~ 22149787 (+) |
| G42448 | NA | non-coding | upstream | 348880 | 22148294 ~ 22148513 (+) |
| G42350 | NA | non-coding | upstream | 896425 | 21528781 ~ 21600968 (+) |
| G42488 | NA | non-coding | downstream | 15936 | 22514864 ~ 22570081 (+) |
| G42518 | NA | non-coding | downstream | 193004 | 22691932 ~ 22692216 (+) |
| G42554 | NA | non-coding | downstream | 362887 | 22861815 ~ 22862982 (+) |
| G42619 | NA | non-coding | downstream | 1055744 | 23554672 ~ 23560660 (+) |
| G42705 | NA | non-coding | downstream | 1285480 | 23784408 ~ 23831400 (+) |
| AMCG00013147 | NA | other | upstream | 236577 | 22248497 ~ 22260816 (+) |
| G42453 | NA | other | upstream | 251603 | 22242429 ~ 22245790 (+) |
| G42344 | LOC108412647 | other | upstream | 1010585 | 21426660 ~ 21486808 (+) |
| AMCG00013118 | LOC106594791 | other | upstream | 1025833 | 21286031 ~ 21471560 (+) |
| AMCG00013198 | NA | other | downstream | 1742341 | 24241269 ~ 24331854 (+) |
| G42846 | NA | other | downstream | 2248564 | 24747492 ~ 24749395 (+) |
| G42858 | NA | other | downstream | 2269496 | 24768424 ~ 24770148 (+) |
| AMCG00013236 | NA | other | downstream | 3014425 | 25513353 ~ 25521681 (+) |
| AMCG00013248 | NA | other | downstream | 3294477 | 25793405 ~ 25798013 (+) |
