AMCG00013155 (LOC108443565,LOC103481883)


Basic Information

Item Value
gene id AMCG00013155
gene name LOC108443565,LOC103481883
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 22512829 ~ 22514649 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013155
TTGCCCTCATCTCGCAATACTCCCAGCCCAATTGACCCTGAGAGCATCCAGGTCCCGGTGGGCTATGAGCCAGACCCCGCAGACTTGGCCCTATCCAGCGTCCCCGGACAGGAGATGTTTGACCCTCGCAAGCGGAAGTTCTCAGAGGAAGAGCTCAAACCACAGCCAATGATCAAAAAGGCCCGCAAGGTCTTCATTCCAGACGATATGAAGGACGACAAATACTGGGCAAGGCGCAGAAAGAACAACATGGCTGCCAAGAGGTCGAGAGACGCCAGGCGGCTGAAGGAGAACCAGATCGCCATTCGTGCCGGCTTCCTGGAGAAGGAGAATTCAGCCCTGCGCCAGGAGGTGGCCGACTTACGGAAAGAGCTGGGCCGCTGCAAGAACATTCTGGCCAAATACGAGTCCCAGCACGGGCCCATG

Function

NR:

description
PREDICTED: hepatic leukemia factor-like

GO: NA

KEGG:

id description
K09057 HLF; hepatic leukemia factor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013155 True 426 mRNA 0.58 2 22512829 22514649

Neighbor

gene id symbol gene type direction distance location
AMCG00013154 NA coding upstream 13901 22497393 ~ 22498928 (+)
AMCG00013152 NA coding upstream 42642 22379235 ~ 22470187 (+)
AMCG00013149 foxk2,LOC107719587,LOC106601484 coding upstream 220328 22276342 ~ 22292501 (+)
AMCG00013148 NA coding upstream 284333 21930055 ~ 22228496 (+)
AMCG00013146 dnah9 coding upstream 601088 21773242 ~ 21911741 (+)
AMCG00013158 NA coding downstream 134527 22649176 ~ 22655621 (+)
AMCG00013161 LOC107722232 coding downstream 158553 22673202 ~ 22858651 (+)
AMCG00013162 NA coding downstream 367259 22881908 ~ 22923730 (+)
AMCG00013165 NA coding downstream 886491 23401140 ~ 23410915 (+)
AMCG00013166 LOC107581581,LOC108435270,LOC107684054 coding downstream 919191 23433840 ~ 23443384 (+)
G42464 wdr45b non-coding upstream 208087 22300573 ~ 22304742 (+)
G42459 NA non-coding upstream 246193 22266357 ~ 22266636 (+)
G42449 NA non-coding upstream 363042 22149585 ~ 22149787 (+)
G42448 NA non-coding upstream 364316 22148294 ~ 22148513 (+)
G42350 NA non-coding upstream 911861 21528781 ~ 21600968 (+)
G42488 NA non-coding downstream 215 22514864 ~ 22570081 (+)
G42518 NA non-coding downstream 177283 22691932 ~ 22692216 (+)
G42554 NA non-coding downstream 347166 22861815 ~ 22862982 (+)
G42619 NA non-coding downstream 1040023 23554672 ~ 23560660 (+)
G42705 NA non-coding downstream 1269759 23784408 ~ 23831400 (+)
AMCG00013147 NA other upstream 252013 22248497 ~ 22260816 (+)
G42453 NA other upstream 267039 22242429 ~ 22245790 (+)
G42344 LOC108412647 other upstream 1026021 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 1041269 21286031 ~ 21471560 (+)
AMCG00013198 NA other downstream 1726620 24241269 ~ 24331854 (+)
G42846 NA other downstream 2232843 24747492 ~ 24749395 (+)
G42858 NA other downstream 2253775 24768424 ~ 24770148 (+)
AMCG00013236 NA other downstream 2998704 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 3278756 25793405 ~ 25798013 (+)

Expression


Co-expression Network