Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013158 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 22649176 ~ 22655621 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008289 | lipid binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013158 | True | 1053 | mRNA | 0.45 | 6 | 22649176 | 22655621 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013155 | LOC108443565,LOC103481883 | coding | upstream | 134527 | 22512829 ~ 22514649 (+) |
| AMCG00013154 | NA | coding | upstream | 150248 | 22497393 ~ 22498928 (+) |
| AMCG00013152 | NA | coding | upstream | 178989 | 22379235 ~ 22470187 (+) |
| AMCG00013149 | foxk2,LOC107719587,LOC106601484 | coding | upstream | 356675 | 22276342 ~ 22292501 (+) |
| AMCG00013148 | NA | coding | upstream | 420680 | 21930055 ~ 22228496 (+) |
| AMCG00013161 | LOC107722232 | coding | downstream | 17581 | 22673202 ~ 22858651 (+) |
| AMCG00013162 | NA | coding | downstream | 226287 | 22881908 ~ 22923730 (+) |
| AMCG00013165 | NA | coding | downstream | 745519 | 23401140 ~ 23410915 (+) |
| AMCG00013166 | LOC107581581,LOC108435270,LOC107684054 | coding | downstream | 778219 | 23433840 ~ 23443384 (+) |
| AMCG00013167 | LOC103369437 | coding | downstream | 876330 | 23531951 ~ 23540214 (+) |
| G42488 | NA | non-coding | upstream | 79095 | 22514864 ~ 22570081 (+) |
| G42464 | wdr45b | non-coding | upstream | 344434 | 22300573 ~ 22304742 (+) |
| G42459 | NA | non-coding | upstream | 382540 | 22266357 ~ 22266636 (+) |
| G42449 | NA | non-coding | upstream | 499389 | 22149585 ~ 22149787 (+) |
| G42448 | NA | non-coding | upstream | 500663 | 22148294 ~ 22148513 (+) |
| G42518 | NA | non-coding | downstream | 36311 | 22691932 ~ 22692216 (+) |
| G42554 | NA | non-coding | downstream | 206194 | 22861815 ~ 22862982 (+) |
| G42619 | NA | non-coding | downstream | 899051 | 23554672 ~ 23560660 (+) |
| G42705 | NA | non-coding | downstream | 1128787 | 23784408 ~ 23831400 (+) |
| G42779 | sstr5,LOC104918336,LOC102219310,LOC102291375 | non-coding | downstream | 1342173 | 23997794 ~ 24003887 (+) |
| AMCG00013147 | NA | other | upstream | 388360 | 22248497 ~ 22260816 (+) |
| G42453 | NA | other | upstream | 403386 | 22242429 ~ 22245790 (+) |
| G42344 | LOC108412647 | other | upstream | 1162368 | 21426660 ~ 21486808 (+) |
| AMCG00013118 | LOC106594791 | other | upstream | 1177616 | 21286031 ~ 21471560 (+) |
| AMCG00013198 | NA | other | downstream | 1585648 | 24241269 ~ 24331854 (+) |
| G42846 | NA | other | downstream | 2091871 | 24747492 ~ 24749395 (+) |
| G42858 | NA | other | downstream | 2112803 | 24768424 ~ 24770148 (+) |
| AMCG00013236 | NA | other | downstream | 2857732 | 25513353 ~ 25521681 (+) |
| AMCG00013248 | NA | other | downstream | 3137784 | 25793405 ~ 25798013 (+) |
