AMCG00013164


Basic Information

Item Value
gene id AMCG00013164
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 22929749 ~ 22937784 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013164
CGTGTGTGGAGCAGTGCGGTCAGTGTGGTGTAAAGTACAAGATGGTAAAGGGCCTTTTGAGCAGAACCCAAATGATCGTGTTATGGACAATGTCAATGAGCTTCCTCCTGTTGCCTCCATCCCTCGGAGCACCAATGAGTGGCTCTCCAGCCAGGAATCACAACAAGCTGTTGCTCATCTCCTTTGACGGCTTCCGGTGGGACTACGACCACGATGTGGACACCCCACATTTGGATGCAATGGCACAAGATGGGGTCAAAGCCACTTATGTCACTCCACCCTACATCTCCATCACCAGCCCTTCACACTTCACACTGTTGACAGGAAAGTATGTGGAGAACCACGGTGTGATCCATAACATGTGGTTTAACATAACCACCGGAGAGAAGAAGCCATACTACATGACTCAGTTTGTCGATGAATGGTGGGACAATGGCAGCTTGCCTATCTGGattacagcacagaaacagGGTCTGAAGGCTGGCTCACTCCACTTTCCTGGTACTGCACCCACCTACCAGGGTGAGAGGGTTCAGGTGAGCGAGGTGGAGCCACGCTTCTACGATTACAAAAATGAGACAGAGTGGCGGCACAACGTGGATAAGGTGATGAGCTGGCTCAGCGAAAAAAGCCTGGATTTGGTGACACTGTATTTCGGAGAGCCAGACGGCACCGGGCACAAATATGGACCCGATTCGCCAGAGAGAAGGGACATGGTTGCGCAGGTGGACCGCACTGTGGGGTACATCCGCAGCTCCGCCACCCGCCACGGCCTTGCAGACAACCtcaacatcatcatcacagCTGACCACGGCATGAGCACTGTCCTCAAGGCGCCGGCTGTCAAAGAGATCATCCTGTCTGAGATACCAGGATTCAGCTTACGTGACCTCCAGTTCCAAATCACCGACTACGGCCCTGCCAGCCTGCTGCTCCCCAAGGAGGGCCTGCTGGATAAGGTCTACAACATCTTGAAGGATGCACATCCTCACCTGCATGTGTACAAGAAAGAAGACCTGCCCACCCGGCTCCAATACTCCACCAACCCCCGTATCCTGCCCCTCTTTCTCTATGGGGACCCTGGATATGTAATACACGGGCTACTACCACTGCAGTTTAACAAGGGGGAGCACGGCTTTGACAACGAGGCCATGGACATGAAGGCCATTTTTCGGGCAGTTGGGCCAGCCTTCAAGAAGAACCAGGTGGTGGGTCCCTTTGAGACGGTCAATGTTTACGCCCTGATGTGTCACCTGCTGAACATTGAGCCCGAGCCCCACGACGGTTCCCTTGAAGCCACCCAAAACATGCTGATCACATCCCCCGAACAGAGTACAGCTCCACAGAGAAAGACTCAGAAgataaagcagaaaaacaaaaacaaacaagcttcTGATCGTGATATGGAAAGAATGAACATCACCAAGTGATATTTCGGATGAACATAACTGCCTATTACAAATTAGACAAAGAAGAAAGCAACTTCCCATGAATAGACTCTCTCAAAATGTTAGCTCATATTTCTGTTACACCAGGGATATGGGCTTCCTTGGCATGAATActgattgtgtatttttatccATCAGATATAAGTTcatccaacaaaacaaaattcaacTACATTACGCACAACTCTGTTTGTCCTGTGATCGTTTTAAAACAGGAGCATCATTCATAGAAAGCCTGTTGAAAattaactgctttaaaaaatctTAACTGATGACTAGATCATGAACTATAGATAGCATCCACGCAATTTaaagtatgtgtatttattataattgtatgatcccacaggtattttattttacataattattattatgcattgttTTCCTGCAAAGCTGAAGTTAGCAGTTAGGATTCAGTGAGGATGTAATAACTGCATGAAAGCACTGCTACAAGAACTGGTGATTTACAAAATACCAGgcagacacaaaaaaacacattaaaaagtaataaaatcgTCCACAGATGTCATTATCTCTACACTGCATTCTGTAGTATTATGAAAGGCAGTTTCTAACACGTAATATTGATTGTAGAAAAAGAATGTTTACTGTTGACTGTAAAAGGCTTTTCACACATTGTAACCTTAATTATCACAACACTATGTTTATTACATACTTCTATCCTTAGaattcttcaaaataaaaatcaagtgATGCAATACAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K12354 ENPP7; ectonucleotide pyrophosphatase/phosphodiesterase family member 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013164 True 2175 mRNA 0.45 5 22929749 22937784

Neighbor

gene id symbol gene type direction distance location
AMCG00013163 NA coding downstream 1308 22919298 ~ 22928441 (-)
AMCG00013159 tmem100,LOC102794428 coding downstream 284542 22644803 ~ 22645207 (-)
AMCG00013160 NA coding downstream 298448 22610602 ~ 22631301 (-)
AMCG00013157 NA coding downstream 357689 22571776 ~ 22572060 (-)
AMCG00013156 NA coding downstream 380242 22537159 ~ 22549507 (-)
AMCG00013170 NA coding upstream 534749 23472533 ~ 23483799 (-)
AMCG00013169 NA coding upstream 548561 23486345 ~ 23492834 (-)
AMCG00013168 LOC108435267,LOC107755502,LOC107722214,LOC107581584,LOC107702479 coding upstream 616888 23554672 ~ 23563336 (-)
AMCG00013177 gps1,LOC107654488,LOC107721507,LOC107688111 coding upstream 772916 23710700 ~ 23721512 (-)
AMCG00013178 rac3a,rac3,rac3b,LOC108436959,LOC106610298,LOC100712409 coding upstream 806962 23744746 ~ 23756601 (-)
G42557 NA non-coding downstream 113380 22816156 ~ 22816369 (-)
G42553 NA non-coding downstream 223412 22706066 ~ 22706337 (-)
G42544 NA non-coding downstream 354922 22574558 ~ 22574827 (-)
G42450 NA non-coding downstream 779957 22149581 ~ 22149792 (-)
G42440 dnah9 non-coding downstream 1024152 21893624 ~ 21905597 (-)
G42704 NA non-coding upstream 841141 23778925 ~ 23779350 (-)
G42743 NA non-coding upstream 963659 23901443 ~ 23901920 (-)
G42760 NA non-coding upstream 975007 23912791 ~ 23917024 (-)
G42800 NA non-coding upstream 1282867 24220651 ~ 24222738 (-)
G42993 NA non-coding upstream 2107594 25045378 ~ 25376323 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other downstream 1402917 21503849 ~ 21526832 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other downstream 1479795 21448329 ~ 21449954 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other downstream 1507631 21411939 ~ 21422118 (-)
G42381 LOC102793686,LOC103366176,LOC105910910 other downstream 1553986 21337067 ~ 21375763 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other upstream 888825 23826609 ~ 23839146 (-)
G42749 NA other upstream 906299 23844083 ~ 23847477 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 1941857 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 2087954 25025738 ~ 25029004 (-)
G43001 NA other upstream 2137609 25075393 ~ 25078244 (-)

Expression


Co-expression Network