AMCG00013165


Basic Information

Item Value
gene id AMCG00013165
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 23401140 ~ 23410915 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013165
ATGAtgggtaACCAAGAAGCCACAGCCCCCCCAGAAGCGATGGCCCAGCCGTACCCCCCAGCCCAgtaccccccgcccccccaaaaCGGGATCCCGGAGTACGCAGCgccacacccccaccccacacaggACTACACAGGGCAGAACACAGTGCCAGAGCATGCCATGACCATCTAcacccccacacagacacactcagacCAGCCGGGCAACGACTCCAACACACCCTCCCTCACTGGCACAACGACAGTACCGCAGACAGACGAGGTGGCGCAGACAGAGGGCTCACAGCAGCTACAGCTACAGCCCACAGACACTTCGGAGAAGCAGCAGCCCAAACGGTTACATGTCTCCAACATCCCCTTCCGCTTCCGAGACCCCGACTTGCGGCAAATGTTCGGGGTGAGTCTGGGGCTATGGGAAGTTTCTTACTGGTGGTTTACTAAAGGGGTTTGGGTCGAAATCAGCACAACACATAGGTTATGTCCTTCACGGTATTTCTCGAAAGTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013165 True 513 mRNA 0.58 3 23401140 23410915

Neighbor

gene id symbol gene type direction distance location
AMCG00013162 NA coding upstream 477410 22881908 ~ 22923730 (+)
AMCG00013161 LOC107722232 coding upstream 542489 22673202 ~ 22858651 (+)
AMCG00013158 NA coding upstream 745519 22649176 ~ 22655621 (+)
AMCG00013155 LOC108443565,LOC103481883 coding upstream 886491 22512829 ~ 22514649 (+)
AMCG00013154 NA coding upstream 902212 22497393 ~ 22498928 (+)
AMCG00013166 LOC107581581,LOC108435270,LOC107684054 coding downstream 22925 23433840 ~ 23443384 (+)
AMCG00013167 LOC103369437 coding downstream 121036 23531951 ~ 23540214 (+)
AMCG00013171 NA coding downstream 170796 23581711 ~ 23610831 (+)
AMCG00013172 fasn coding downstream 207222 23618137 ~ 23651153 (+)
AMCG00013173 dus1l coding downstream 242584 23653499 ~ 23681825 (+)
G42554 NA non-coding upstream 538158 22861815 ~ 22862982 (+)
G42518 NA non-coding upstream 708924 22691932 ~ 22692216 (+)
G42488 NA non-coding upstream 831059 22514864 ~ 22570081 (+)
G42464 wdr45b non-coding upstream 1096398 22300573 ~ 22304742 (+)
G42459 NA non-coding upstream 1134504 22266357 ~ 22266636 (+)
G42619 NA non-coding downstream 143757 23554672 ~ 23560660 (+)
G42705 NA non-coding downstream 373493 23784408 ~ 23831400 (+)
G42779 sstr5,LOC104918336,LOC102219310,LOC102291375 non-coding downstream 586879 23997794 ~ 24003887 (+)
G42780 NA non-coding downstream 596438 24007353 ~ 24007850 (+)
G42816 NA non-coding downstream 999927 24410842 ~ 24411044 (+)
AMCG00013147 NA other upstream 1140324 22248497 ~ 22260816 (+)
G42453 NA other upstream 1155350 22242429 ~ 22245790 (+)
G42344 LOC108412647 other upstream 1914332 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 1929580 21286031 ~ 21471560 (+)
AMCG00013198 NA other downstream 830354 24241269 ~ 24331854 (+)
G42846 NA other downstream 1336577 24747492 ~ 24749395 (+)
G42858 NA other downstream 1357509 24768424 ~ 24770148 (+)
AMCG00013236 NA other downstream 2102438 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 2382490 25793405 ~ 25798013 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G238673 NA non-coding CI01000055 null 1992402 ~ 2366225 (+)
eurasian perch (Perca fluviatilis) G199759 NA non-coding NC_053131.1 CM020928.1 3080502 ~ 3081704 (+)