AMCG00013167 (LOC103369437)


Basic Information

Item Value
gene id AMCG00013167
gene name LOC103369437
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 23531951 ~ 23540214 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013167
TGTGCAGAAATATCCATAAGCTGATTGTTCTGTTTGTTGCAGGAAAACAAGCTACAGAAGCTACTAGCAGTGGCAGCACAAAAGgcacTGATATTTCTGTTGGAGAAGAAGTTGCCATAAAGCTAgaatgtgtgaaaacaaaacaccctcAGCTGCACATCGAGAGCAAGATCTACAAAATGATGCAGGGGGGAGTTGGCATTCCCACGATCAAATGGTGTGGCGCTGAGGGAGATTATAACGTGATGGTCATGGAGTTACTGGGACCTAGTCTCGAGGACCTGTTCAACTTTTGCTCGCGGAAATTCAGCTTGAAGACAGTGTTGCTTCTAGCAGACCAGATGATCAGCCGTATTGAGTATATCCACTCCAAGAACTTCATCCACAGAGATGTGAAACCAGACAACTTCTTGATGGGGCTGGGGAAAAAAGGCAACCTTGTTTACATCATTGACTTTGGTTTGGCCAAGAAATACCGGGATGCTCGCACACACCAGCACATCCCCTACCGTGAGAACAAGAACCTTACCGGCACGGCGCGCTACGCCTCCATCAACACACATCTGGGAATAGAGCAGTCCCGTCGAGATGACCTAGAGTCCCTGGGCTATGTGCTGATGTACTTCAACCTGGGCTCTCTGCCCTGGCAAGGCCTGAAAGCAGCCACCAAAAGGCAGAAATATGAGCGCATCAGTGAGAAGAAAATGTCTACCCCCATCGAAGTCCTCTGCAAGGGATACCCCTCTGAATTTGCCACATACCTCAACTTCTGCCGTTCCCTGCGCTTCGACGACAAGCCGGACTACTCCTACCTGAGACAGCTGTTCAGGAACTTGTTCCACAGACAAGGCTTTTCCTATGACTACGTGTTCGACTGGAATATGCTCAAGTTTGGTGCCAACAGAGCTGCAGAAGATGCAGAGCGCGagaggagggacagagaggagcGACTGAGACACACCAGGAACCCGGGCACCAGGGGCATTCCCTCTGCCTCTGGGAGACCAAGAGGAACGCAGGATGTCGCCCCCCCTACCCCACTAACCCCCACCTCTCACACCGCAAACACGTCGCCGCGCCCAGTGTCAGGGATGGACAGGGAACGGAAAGTCAGTATGAGATTGCACCGCGGAGCCCCCGTCAACATCTCCTCCTCTGACCTCACTGGGCGGCAGGACACCTCACGCATGTCCACGTCACAGGTACGAGCTAGTCCCACAGCAGAGCTCACCGGCTGA

Function

NR:

description
PREDICTED: casein kinase I isoform delta-B isoform X1

GO: NA

KEGG:

id description
K08959 CSNK1D; casein kinase 1, delta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013167 True 1238 mRNA 0.53 8 23531951 23540214

Neighbor

gene id symbol gene type direction distance location
AMCG00013166 LOC107581581,LOC108435270,LOC107684054 coding upstream 88567 23433840 ~ 23443384 (+)
AMCG00013165 NA coding upstream 121036 23401140 ~ 23410915 (+)
AMCG00013162 NA coding upstream 608221 22881908 ~ 22923730 (+)
AMCG00013161 LOC107722232 coding upstream 673300 22673202 ~ 22858651 (+)
AMCG00013158 NA coding upstream 876330 22649176 ~ 22655621 (+)
AMCG00013171 NA coding downstream 41497 23581711 ~ 23610831 (+)
AMCG00013172 fasn coding downstream 77923 23618137 ~ 23651153 (+)
AMCG00013173 dus1l coding downstream 113285 23653499 ~ 23681825 (+)
AMCG00013179 NA coding downstream 148604 23688818 ~ 23690170 (+)
AMCG00013174 rfng,LOC106610281,LOC107708990 coding downstream 181943 23722157 ~ 23735304 (+)
G42554 NA non-coding upstream 668969 22861815 ~ 22862982 (+)
G42518 NA non-coding upstream 839735 22691932 ~ 22692216 (+)
G42488 NA non-coding upstream 961870 22514864 ~ 22570081 (+)
G42464 wdr45b non-coding upstream 1227209 22300573 ~ 22304742 (+)
G42459 NA non-coding upstream 1265315 22266357 ~ 22266636 (+)
G42619 NA non-coding downstream 14458 23554672 ~ 23560660 (+)
G42705 NA non-coding downstream 244194 23784408 ~ 23831400 (+)
G42779 sstr5,LOC104918336,LOC102219310,LOC102291375 non-coding downstream 457580 23997794 ~ 24003887 (+)
G42780 NA non-coding downstream 467139 24007353 ~ 24007850 (+)
G42816 NA non-coding downstream 870628 24410842 ~ 24411044 (+)
AMCG00013147 NA other upstream 1271135 22248497 ~ 22260816 (+)
G42453 NA other upstream 1286161 22242429 ~ 22245790 (+)
G42344 LOC108412647 other upstream 2045143 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 2060391 21286031 ~ 21471560 (+)
AMCG00013198 NA other downstream 701055 24241269 ~ 24331854 (+)
G42846 NA other downstream 1207278 24747492 ~ 24749395 (+)
G42858 NA other downstream 1228210 24768424 ~ 24770148 (+)
AMCG00013236 NA other downstream 1973139 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 2253191 25793405 ~ 25798013 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004849 csnk1db coding NC_007123.7 CM002896.2 33320504 ~ 33336787 (+)
grasscarp (Ctenopharyngodon idella) CI01000046_07037314_07046456 CSNK1DB, CSNK1D coding CI01000046 null 7037314 ~ 7046586 (+)