Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013175 |
| gene name | dcxr |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 23736663 ~ 23740597 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| dcxr | Predicted to enable L-xylulose reductase (NADP+) activity and carbonyl reductase (NADPH) activity. Predicted to be involved in glucose metabolic process and xylulose metabolic process. Human ortholog(s) of this gene implicated in pentosuria. Orthologous to human DCXR (dicarbonyl and L-xylulose reductase). |
| description |
|---|
| PREDICTED: L-xylulose reductase isoform X2 |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016491 | oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K03331 | DCXR; L-xylulose reductase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013175 | True | 1256 | mRNA | 0.51 | 9 | 23736663 | 23740597 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013174 | rfng,LOC106610281,LOC107708990 | coding | upstream | 1359 | 23722157 ~ 23735304 (+) |
| AMCG00013179 | NA | coding | upstream | 46493 | 23688818 ~ 23690170 (+) |
| AMCG00013173 | dus1l | coding | upstream | 54838 | 23653499 ~ 23681825 (+) |
| AMCG00013172 | fasn | coding | upstream | 85510 | 23618137 ~ 23651153 (+) |
| AMCG00013171 | NA | coding | upstream | 125832 | 23581711 ~ 23610831 (+) |
| AMCG00013183 | NA | coding | downstream | 35349 | 23775946 ~ 23802064 (+) |
| AMCG00013182 | NA | coding | downstream | 67646 | 23808243 ~ 23825285 (+) |
| AMCG00013180 | NA | coding | downstream | 99997 | 23840594 ~ 23847430 (+) |
| AMCG00013181 | wipi1,LOC107719990,LOC107590389,LOC107688112,LOC107721503 | coding | downstream | 108578 | 23849175 ~ 23864196 (+) |
| AMCG00013186 | NA | coding | downstream | 146987 | 23887584 ~ 23901607 (+) |
| G42619 | NA | non-coding | upstream | 176003 | 23554672 ~ 23560660 (+) |
| G42554 | NA | non-coding | upstream | 873681 | 22861815 ~ 22862982 (+) |
| G42518 | NA | non-coding | upstream | 1044447 | 22691932 ~ 22692216 (+) |
| G42488 | NA | non-coding | upstream | 1166582 | 22514864 ~ 22570081 (+) |
| G42464 | wdr45b | non-coding | upstream | 1431921 | 22300573 ~ 22304742 (+) |
| G42705 | NA | non-coding | downstream | 43811 | 23784408 ~ 23831400 (+) |
| G42779 | sstr5,LOC104918336,LOC102219310,LOC102291375 | non-coding | downstream | 257197 | 23997794 ~ 24003887 (+) |
| G42780 | NA | non-coding | downstream | 266756 | 24007353 ~ 24007850 (+) |
| G42816 | NA | non-coding | downstream | 670245 | 24410842 ~ 24411044 (+) |
| G42845 | NA | non-coding | downstream | 1004926 | 24745523 ~ 24745754 (+) |
| AMCG00013147 | NA | other | upstream | 1475847 | 22248497 ~ 22260816 (+) |
| G42453 | NA | other | upstream | 1490873 | 22242429 ~ 22245790 (+) |
| G42344 | LOC108412647 | other | upstream | 2249855 | 21426660 ~ 21486808 (+) |
| AMCG00013118 | LOC106594791 | other | upstream | 2265103 | 21286031 ~ 21471560 (+) |
| AMCG00013198 | NA | other | downstream | 500672 | 24241269 ~ 24331854 (+) |
| G42846 | NA | other | downstream | 1006895 | 24747492 ~ 24749395 (+) |
| G42858 | NA | other | downstream | 1027827 | 24768424 ~ 24770148 (+) |
| AMCG00013236 | NA | other | downstream | 1772756 | 25513353 ~ 25521681 (+) |
| AMCG00013248 | NA | other | downstream | 2052808 | 25793405 ~ 25798013 (+) |
