AMCG00013179


Basic Information

Item Value
gene id AMCG00013179
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 23688818 ~ 23690170 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013179
atgtgtgtgggtgCCGCCGGGGACACTCTTGGACTTGCCCGAAGGATCAAGCGCACGAGAAAGACTGACGCTATGAATTTCACAGAGTTTTACCTGAAATTCGGCCACCTGTTCCCAAAGAATGTTTCTTTTCCGGGTCAAAGTCACAGGAATGCCAGTGTCCGGGACGAGATGCCCTTCACGGACAGTGTGCTTTTCTCGGGACATGAACCGGGAACCATAGTGCTGGTGGTGATGTACACTCTGTCCTTCATCATCGGGCTCGGGGGGAATATCATGGCATTGAGGGTCCTGACCATGAAGAAGAGGAACCGTCTGGCCGGCGTGTCGGCGACCAGGAGCCTTCTGGTGAACCTGGCCGTGTGCGATATGATGGTCGTGTGCATCTGCATGCCGGTGAACCTTGGCCACCAGGTGTACAACGCCTGGGTGTTTGGTGAGTTTCTGTGCCGCGCTGTCCCCTTCGTCCAGGCTGTGTCTGTGTCGGCCAGCGTCCTGAGCCTGGCGGTGATCAGCCTGAACCGATACTACAGTGTCCACAACCCCCTGCACGCCAGATCCTTCTTCACCTGGAGGAAGATCTTTTGGATGATCTGCGTGGTGTGGACCCTGTCCTCGGGGCTGTGCATGCCCCTGATCTTCATGAACAAGACCAAGCAACTTGTGCTGCTGGACAGCAAGCACCCCTTCATCGTGTGCGTGGAGAGCTGGCCCCACGTCAAACTGCGGCAGGCGTATAACTTTCTGCTCTTCTGCGCCCTATATGGGTTCCCAGTTTTGTTTAACCTCATCATTTGCTTCCTAACCGGGCGCAAGCTGTGGAGCACGGACGACAAGTTTAAAGAGTGTAACAGGTGCAACTTAGCTCAGTCGCTCTCCCGCCTGAAAATGCGCAAGAAGATCGCCAAGATGGTGGTGGCTCTGGTGCTGCTGTTCACTCTGTCCTGGCTGCCTCTGTACGTGGTGGACATCTGGATCGACTTCAACATGCCCAATGCCCTGGGGGGCGAGGACGACCTGGAGCACGTAAAGCACGAGTGGATACTGCAAGGGCGGCCCTTTGCGCAGTGGCTGGGTCTCACCAACTCAACCCTCAACCCGCTGTGCTACTGCTTTGTGGGGAACCTCTACAGATCGGCTCAAAGGTTCCGTAAAAGCTACCGAGAAAAGTTTTCCTCGGTGTTCAGTCTGGCCTCGACCCGAGCATCGACTAGCAGCTCGGTGCCAAAGCTGGTTTCCTACAGCCAGGCTTCCGCCGAGAGCTGCGGCACGGAGAGATGCGCTTGGAGAGGCTTCAGCGGCAAGAGCCAGAGCCTGTCGTCGGTGACCGAGTGCGAAACGGTGTTTGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013179 True 1353 mRNA 0.57 1 23688818 23690170

Neighbor

gene id symbol gene type direction distance location
AMCG00013173 dus1l coding upstream 6993 23653499 ~ 23681825 (+)
AMCG00013172 fasn coding upstream 37665 23618137 ~ 23651153 (+)
AMCG00013171 NA coding upstream 77987 23581711 ~ 23610831 (+)
AMCG00013167 LOC103369437 coding upstream 148604 23531951 ~ 23540214 (+)
AMCG00013166 LOC107581581,LOC108435270,LOC107684054 coding upstream 245434 23433840 ~ 23443384 (+)
AMCG00013174 rfng,LOC106610281,LOC107708990 coding downstream 31987 23722157 ~ 23735304 (+)
AMCG00013175 dcxr coding downstream 46493 23736663 ~ 23740597 (+)
AMCG00013183 NA coding downstream 85776 23775946 ~ 23802064 (+)
AMCG00013182 NA coding downstream 118073 23808243 ~ 23825285 (+)
AMCG00013180 NA coding downstream 150424 23840594 ~ 23847430 (+)
G42619 NA non-coding upstream 128158 23554672 ~ 23560660 (+)
G42554 NA non-coding upstream 825836 22861815 ~ 22862982 (+)
G42518 NA non-coding upstream 996602 22691932 ~ 22692216 (+)
G42488 NA non-coding upstream 1118737 22514864 ~ 22570081 (+)
G42464 wdr45b non-coding upstream 1384076 22300573 ~ 22304742 (+)
G42705 NA non-coding downstream 94238 23784408 ~ 23831400 (+)
G42779 sstr5,LOC104918336,LOC102219310,LOC102291375 non-coding downstream 307624 23997794 ~ 24003887 (+)
G42780 NA non-coding downstream 317183 24007353 ~ 24007850 (+)
G42816 NA non-coding downstream 720672 24410842 ~ 24411044 (+)
G42845 NA non-coding downstream 1055353 24745523 ~ 24745754 (+)
AMCG00013147 NA other upstream 1428002 22248497 ~ 22260816 (+)
G42453 NA other upstream 1443028 22242429 ~ 22245790 (+)
G42344 LOC108412647 other upstream 2202010 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 2217258 21286031 ~ 21471560 (+)
AMCG00013198 NA other downstream 551099 24241269 ~ 24331854 (+)
G42846 NA other downstream 1057322 24747492 ~ 24749395 (+)
G42858 NA other downstream 1078254 24768424 ~ 24770148 (+)
AMCG00013236 NA other downstream 1823183 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 2103235 25793405 ~ 25798013 (+)

Expression


Co-expression Network