AMCG00013185


Basic Information

Item Value
gene id AMCG00013185
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 23866640 ~ 23882268 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013185
ATGAGTTATTTGAAGAAACCAAACTTCATCGTCATCCTGGCTGATGATATTGGCTGGGGAGACCTGGGGCTGAACTGGCCCAGGAGGAGCCACACCCCTCTCCTCAACCTCCTGGCACAGGAAGGCATGAGATTTACAGATTTTCACTCGCCTGCATCCACTTGCTCCCCGTCCCGAGCTTCCTTACTAACGGGCAGACACGGCCTGCGCACTGGGGTGACACACAACTTCGCTGTGGGCTCCACAGGAGGGCTCCCCCTCAACGAGACCACCCTTGCTGAGGTCCTGCAGGGGGCCGGCTACTACACAGCCATGATTGGAAAATGGCATTTAGGGCATCGTGGCCCATATCATCCCAGCCGCCGCGGTTTTGATTACTATTATGGAATTCCGTACAGCAATGACATGGGCTGCACAGACACGCCAGGCTATGACATCCCAGAGTGCCCACCATGTGTCAAAGATCCAGCGAAAGAGAGTGATGAGCACAAAGACTGCTACTCCACTGTGGCACTGCCACTGTTTGAGGACCTGCAGATTGTGGAGCAGCCCCTGGACCTGTGGACCTTGACAGAGAAGTACACACAGAAGGCAGTGGACATAATTCACAAGGCCAGAGAAGTTGGCAAACCCTTCATCCTGTACATCGCCCTGGCACACATGCACGTCCCACTGTCCCCAGCCTCCCATCATGGCAATGTATCCCTGGAAGATGTCTATGCAGCCAGTCTGCAAGAAATGGACAATCTTGTTGGTGCGATAAAAAATGCATCTGATGCCACTGCTAAAGAAAACACACTCATCTGGTTTACTGGTGATAATGGCCCTTGGGACCAGAAATGCCAGTTCTCAGGAAGTGTGGGCCCTTTCTTAGGAAGGTGGCAGTCAGACAGAGGTGGGAGTTCGGCGAAAAAGACAACTTGGGAAGGAGGGCACCGTGTCCCCACTATTGCATACTGGCCAGGAAAGATTCCAGCCAATGTCACTAGCAATGCCCTGCTCAGTGGCCTGGATATCTTCCCCACTGTGCTGTCCCTGGCCGGGGCCAGCCTGCCCCCTCACAGACACTATGATGGCATTGATGTGACCAAAGTCCTCTTCCACCACTCAGATACCGGACACAAGTGTCTTCTCCACCCCAACAGTGGAGCAGCCGGACAGTTTGGGGATCTCCAAGCAGCCCGGCTGGAGCAATACAAGGCGTTCTACATTACAGGTGCTGCAGTGGCCTGCGGTGGGCAGAGGGGACAGGAGGAGCTACACGACCCTCCTCTGATTTTCGACCTTTCCCGGGATGAGGAGGAGGGCAGCCCACTGGACAGCAGCCATGCGGAGTACAAGGCTGTGCTGGAGATggtggagaaagagagggaggcagtGCTGCAGGACATTGCCGCGGACAACGTTTCCCAGGCCGACTATGCCATTGACCCGTCGGCCGCACCCTGCTGTGACCGCAGTCACCCAGCCTGTCGGTGTCGGGGCTAAGGGCTTTACATCGCCCTGCATCAGACACTGTGGTTGTCTGGAGGAGCCCGCGGCATAGCGGGCATACAGCACACAGaaccaaaacatttcagtcacGGAGGTTTGTCATCACACGACCCAGGATGATTGGTTGTTCGCAAAGAAACCCTGTGGGATTGATTCACTTACTGAACAACTTGTTCCTAGTGTAGCCAGACTGCTAGCTCTGTGTGGGGCCACAGCTGGGCAAATTCTACCGATAAAAAAGATCCTTCCAGTGAAAAAGGGAGAGCCAGCCTCCCTAGCTTCCTATGAACAGCAATACAGGAGATGTTGAGATTGAGTTGGCTGTGTCAGGAACAGGCGAAATAtggttgtttttgctgttgtctTTAAATTAGCAAATGGCCATTGTTTATATAGCTCAACCTTGGTTACACTGTAACCAATCAATGTGACAAACAGGTAACACATTGGcactgtttattaattattagcCGTGGAATAAGATAGTAAGTTCATCTTGTACTTTTGCCTTGTATgtgttcttttgtctttttatccCATAATTTGGCATCCCCTTCGTGTGAATAGCAAGGAGAAGGCCGGGGCAGAGTGAACAGGGAAAAGTACACTTGTGAATGTGGTTTTAGTGAGGTAATGACTTTGTGTCTGGAGGCCCTGTACTTTGATAAATGGTTTCAGTTGAATCAATTCAAAAAGGTGTGGCTGTTGCAGTTTAGCAGATGCAGTGTGCTGGAGCAATACATTTGCAtgtgattgtattattaataacagtttAAGGTTATTATATTAGCTGAATTGTTCATACAGTTTCTCTTTaggtaatgttttatataaattacattcacAGGTCATCCTGACataataaattcattttttttcctacagAAGTCCAGATTGCTTTCAAAGTTAGCACAAACAGATCTCAACCATAGATTTTTCAAGGATTGCTGTTGGCGTCTATGCATTGTAAATCTCtgcagaaacaaaattctcAAGCTGCACTCAGTTTATAGATGACTGCTTCAAGGCTATATATCTGTTGTACTGAAGACGTCCTTGACAGAGCTAGATAAGACCAGAATCATTGTCTTGGTCTATTTTTACACCATTCCATTGATAGCCAAAAGTAgtttcctttttcagttttcatttaaataaattaatattatattttaagtgttaCACCAAATCTGAGGGCTGAATGAACTGAAATATCTTcggggggaaataaaacatgaaccCATACCCACTAAAGATGTAGGGTTCTAAATTTTAAAAAGAGAGTGAGGTGAGGTGGTAGGTGGCCCCACAGCCATTCAAATTAAGTCAAGGTCTAAGATTCTTGCATAGTATTCTGTTCA

Function

GO: NA

KEGG:

id description
K12381 ARSG; arylsulfatase G

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013185 True 2855 mRNA 0.48 11 23866640 23882268

Neighbor

gene id symbol gene type direction distance location
AMCG00013176 lrrc45 coding downstream 93607 23758274 ~ 23773033 (-)
AMCG00013178 rac3a,rac3,rac3b,LOC108436959,LOC106610298,LOC100712409 coding downstream 110039 23744746 ~ 23756601 (-)
AMCG00013177 gps1,LOC107654488,LOC107721507,LOC107688111 coding downstream 145128 23710700 ~ 23721512 (-)
AMCG00013168 LOC108435267,LOC107755502,LOC107722214,LOC107581584,LOC107702479 coding downstream 303304 23554672 ~ 23563336 (-)
AMCG00013169 NA coding downstream 373806 23486345 ~ 23492834 (-)
AMCG00013190 NA coding upstream 20650 23902918 ~ 23912316 (-)
AMCG00013191 LOC107721501,LOC107688114,LOC107590387,LOC107601276,LOC107654495 coding upstream 34932 23917200 ~ 23927578 (-)
AMCG00013189 LOC108438014,LOC105012792,LOC105899987,LOC107719992,LOC107654495 coding upstream 59443 23941711 ~ 23948688 (-)
AMCG00013192 NA coding upstream 102859 23985127 ~ 23995256 (-)
AMCG00013193 sstr5,LOC104918336,LOC102219310,LOC103393002,LOC102291375 coding upstream 120458 24002726 ~ 24003841 (-)
G42704 NA non-coding downstream 87290 23778925 ~ 23779350 (-)
G42557 NA non-coding downstream 1050271 22816156 ~ 22816369 (-)
G42553 NA non-coding downstream 1160303 22706066 ~ 22706337 (-)
G42544 NA non-coding downstream 1291813 22574558 ~ 22574827 (-)
G42450 NA non-coding downstream 1716848 22149581 ~ 22149792 (-)
G42743 NA non-coding upstream 19175 23901443 ~ 23901920 (-)
G42760 NA non-coding upstream 30523 23912791 ~ 23917024 (-)
G42800 NA non-coding upstream 338383 24220651 ~ 24222738 (-)
G42993 NA non-coding upstream 1163110 25045378 ~ 25376323 (-)
G43011 NA non-coding upstream 1254508 25136776 ~ 25139743 (-)
G42749 NA other downstream 19163 23844083 ~ 23847477 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other downstream 27494 23826609 ~ 23839146 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other downstream 2339808 21503849 ~ 21526832 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other downstream 2416686 21448329 ~ 21449954 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other downstream 2444522 21411939 ~ 21422118 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 997373 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 1143470 25025738 ~ 25029004 (-)
G43001 NA other upstream 1193125 25075393 ~ 25078244 (-)
AMCG00013223 tk1,kith,LOC102792372 other upstream 1279889 25162157 ~ 25166773 (-)
G43070 NA other upstream 1633812 25516080 ~ 25516963 (-)

Expression


Co-expression Network