AMCG00013187


Basic Information

Item Value
gene id AMCG00013187
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 23973082 ~ 23984425 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013187
attattttcaatCAGCAGTCACTCATGAGGTCAAGGGTAAAGTCTTCTGTCTCCATTGGAGGGATTGTGAAGTACACTGAGCAGTACAAAAACCACGATCCTTTCATGGCTGGCTGTCTCCCTAGCAACCCTTGGATAACAGATGACACCATGTTTTGGGAGCTCAATATGCCACTGGCGGAGGTGCCCACAAAGCTACGGGTCGAGCGTTGGACCTTCAACTTCAGAGAGTTGCTCAGTGACCCCCGGGGTCGGCAGGACTTCCAGCTCTTCCTGAAGAAAGAGTTCAGCGGTGAGAACTTGGCCTTCTGGGAAGCCTGTGAAGACCTGAAGTACGGCGACCAGACCAAAGTGAAGGAAAAAGCTGAGGAAATTTACAAgACCTTCTTGGCCCCCGGGGCGCGCCGTTGGATTAACATTGATGGCAAGACAATGGACATCACAGTGAAGGGCCTCCAGCATCCCCATCGCTATGTCCTGGACGCCGCCCAAACACACATCTACATGCTCATGAAGAAGGATTCTTTTGGGCGGTATATGAAGTCTCCTATATTTAAGGATACCATGAAAAAGGCCATCATTCCTGAGGAGACGAAAGTAAGTGAGAGTAAGTTTGGCTTCAGCAAGAAGCACCGCCGCTCGAGCCCCAGTCCCGTCATCCTGCGCCAACTGGAAGAGGAAGCCAAGGCCAAGGCCGCTGCCAACGCCCCTGTGGACATCACACAGCTGTGCAAGTTCACGGCGCCCGTGCCTCACCTGGCGGTGTACACTGGGATCTGTGAGCCCCTGTCCCCCAGCAGCCCTCTGCCCTGTGAGCTcctgcccccctccccaggCCTCATCACCCTGCCCAACAGCGCCGCCTGCCCCTCGCCCATCAGCGTGGCCATCGATAGCACACCCGCCTCCGAGAGGAAGTTCGACGGCACGGGCGGCTCGATGTCGGCCCAATTCCCCTCCATCACCGAGAGTGCCGAGTTGTCCATGGGCTCCGACTCCAGCAATGTCACCCCCGGGCCACCCAAGGAGGCCAGGCCGCCCCCACCCCGGTCCCGAGTGGCACTCTCCTTCAGCCGATTCCTGAAGCGGGGCTGTGCCACCTCACCCGTCTTTGCCACCCTCTCACCGAAGTGCCCCTCGGTTGCCAGCGGACGCATCCAGCCCCTCAACAATGAGCTGCTGTCCTCCCAGCCCACGCAGAAGCCAAAACGAATAGCCAACTTCTTTCAGATCAAAGTGGACATCCCCCCCGAGTGCCGCATCTACCCCATCGactcagaggaggaggaggaggaggagtgtcCCGCCGCGGGCCGCGCCGCTGTGAAGGAGGTCATCTGTCCCTGGGAGACGGTCTCTGAAGAGGGCAAGGCAGGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013187 True 1380 mRNA 0.58 9 23973082 23984425

Neighbor

gene id symbol gene type direction distance location
AMCG00013188 NA coding upstream 11125 23952046 ~ 23961957 (+)
AMCG00013186 NA coding upstream 71475 23887584 ~ 23901607 (+)
AMCG00013181 wipi1,LOC107719990,LOC107590389,LOC107688112,LOC107721503 coding upstream 108886 23849175 ~ 23864196 (+)
AMCG00013180 NA coding upstream 125652 23840594 ~ 23847430 (+)
AMCG00013182 NA coding upstream 147797 23808243 ~ 23825285 (+)
AMCG00013195 NA coding downstream 38406 24022831 ~ 24116258 (+)
AMCG00013197 NA coding downstream 140481 24124906 ~ 24192482 (+)
AMCG00013196 slc39a11,LOC107693650 coding downstream 232085 24216510 ~ 24220719 (+)
AMCG00013200 NA coding downstream 790373 24774798 ~ 24777606 (+)
AMCG00013203 NA coding downstream 804200 24788625 ~ 24793416 (+)
G42705 NA non-coding upstream 141682 23784408 ~ 23831400 (+)
G42619 NA non-coding upstream 412422 23554672 ~ 23560660 (+)
G42554 NA non-coding upstream 1110100 22861815 ~ 22862982 (+)
G42518 NA non-coding upstream 1280866 22691932 ~ 22692216 (+)
G42488 NA non-coding upstream 1403001 22514864 ~ 22570081 (+)
G42779 sstr5,LOC104918336,LOC102219310,LOC102291375 non-coding downstream 13369 23997794 ~ 24003887 (+)
G42780 NA non-coding downstream 22928 24007353 ~ 24007850 (+)
G42816 NA non-coding downstream 426417 24410842 ~ 24411044 (+)
G42845 NA non-coding downstream 761098 24745523 ~ 24745754 (+)
G42847 rnf213,LOC107701915,LOC107556605 non-coding downstream 765267 24749692 ~ 24750256 (+)
AMCG00013147 NA other upstream 1712266 22248497 ~ 22260816 (+)
G42453 NA other upstream 1727292 22242429 ~ 22245790 (+)
G42344 LOC108412647 other upstream 2486274 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 2501522 21286031 ~ 21471560 (+)
AMCG00013198 NA other downstream 256844 24241269 ~ 24331854 (+)
G42846 NA other downstream 763067 24747492 ~ 24749395 (+)
G42858 NA other downstream 783999 24768424 ~ 24770148 (+)
AMCG00013236 NA other downstream 1528928 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 1808980 25793405 ~ 25798013 (+)

Expression


Co-expression Network