Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013188 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 23952046 ~ 23961957 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0043547 | positive regulation of GTPase activity | biological_process |
| GO:0038032 | termination of G protein-coupled receptor signaling pathway | biological_process |
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:0005834 | heterotrimeric G-protein complex | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005096 | GTPase activator activity | molecular_function |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013188 | True | 591 | mRNA | 0.50 | 8 | 23952046 | 23961957 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013186 | NA | coding | upstream | 50439 | 23887584 ~ 23901607 (+) |
| AMCG00013181 | wipi1,LOC107719990,LOC107590389,LOC107688112,LOC107721503 | coding | upstream | 87850 | 23849175 ~ 23864196 (+) |
| AMCG00013180 | NA | coding | upstream | 104616 | 23840594 ~ 23847430 (+) |
| AMCG00013182 | NA | coding | upstream | 126761 | 23808243 ~ 23825285 (+) |
| AMCG00013183 | NA | coding | upstream | 149982 | 23775946 ~ 23802064 (+) |
| AMCG00013187 | NA | coding | downstream | 11125 | 23973082 ~ 23984425 (+) |
| AMCG00013195 | NA | coding | downstream | 60874 | 24022831 ~ 24116258 (+) |
| AMCG00013197 | NA | coding | downstream | 162949 | 24124906 ~ 24192482 (+) |
| AMCG00013196 | slc39a11,LOC107693650 | coding | downstream | 254553 | 24216510 ~ 24220719 (+) |
| AMCG00013200 | NA | coding | downstream | 812841 | 24774798 ~ 24777606 (+) |
| G42705 | NA | non-coding | upstream | 120646 | 23784408 ~ 23831400 (+) |
| G42619 | NA | non-coding | upstream | 391386 | 23554672 ~ 23560660 (+) |
| G42554 | NA | non-coding | upstream | 1089064 | 22861815 ~ 22862982 (+) |
| G42518 | NA | non-coding | upstream | 1259830 | 22691932 ~ 22692216 (+) |
| G42488 | NA | non-coding | upstream | 1381965 | 22514864 ~ 22570081 (+) |
| G42779 | sstr5,LOC104918336,LOC102219310,LOC102291375 | non-coding | downstream | 35837 | 23997794 ~ 24003887 (+) |
| G42780 | NA | non-coding | downstream | 45396 | 24007353 ~ 24007850 (+) |
| G42816 | NA | non-coding | downstream | 448885 | 24410842 ~ 24411044 (+) |
| G42845 | NA | non-coding | downstream | 783566 | 24745523 ~ 24745754 (+) |
| G42847 | rnf213,LOC107701915,LOC107556605 | non-coding | downstream | 787735 | 24749692 ~ 24750256 (+) |
| AMCG00013147 | NA | other | upstream | 1691230 | 22248497 ~ 22260816 (+) |
| G42453 | NA | other | upstream | 1706256 | 22242429 ~ 22245790 (+) |
| G42344 | LOC108412647 | other | upstream | 2465238 | 21426660 ~ 21486808 (+) |
| AMCG00013118 | LOC106594791 | other | upstream | 2480486 | 21286031 ~ 21471560 (+) |
| AMCG00013198 | NA | other | downstream | 279312 | 24241269 ~ 24331854 (+) |
| G42846 | NA | other | downstream | 785535 | 24747492 ~ 24749395 (+) |
| G42858 | NA | other | downstream | 806467 | 24768424 ~ 24770148 (+) |
| AMCG00013236 | NA | other | downstream | 1551396 | 25513353 ~ 25521681 (+) |
| AMCG00013248 | NA | other | downstream | 1831448 | 25793405 ~ 25798013 (+) |
