AMCG00013194


Basic Information

Item Value
gene id AMCG00013194
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 24022377 ~ 24023420 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013194
ATGGAGTCCCAGGACTTTTTAGCGACTGATGCGAACAGCAGATCTTACTTCAATTATTCCAACGACCTGCTTCACAGTGACGACGGGCCCCAGACCTGTCTCTTTGACATGCTGATGGCCGTCCTCTACCTGGGGGTGTGTGTTGTAGGACTTGCTGGAAACTCCCTGGTTATCGTCACCATCCTGAAACTGCACAAGATGGAGACGGCCACTACTGTGTATATCTTCAACCTGGCTCTAGCTGATGGCTTGTTCATGGTGGGGATGCCCTTCTTAGCCCTGCAGAATTTCCGTCACAGCTGGATCTTTGGAGACTTCGCCTGCAAACTGGTCATGATCCTGGATGGTATCAACCAGTTCACCAGTGTTTTCTGCCTGACTGTCATGAGCATTGACCGCTACATGGCCGTGGTCAACCCTATCCGGTTCTCCAAGTGGCGCACCCCGAGAAGGGCCAAGATCATCAGCGTCTTCCTGTGGTTCTTCTCCCTGCTGCCTGTCCTCCCCATGGCTGTCCACTTCACCGCAGGTGGCAGCCTCTGCTCATTGGAACCCCCTGGGTCCCTGGACACGTGGCGGTTGGCTTTCATCATCTACACCTTCACCCTGGGTTTTGCTCTGCCTTTCTTTGTCATGTCGCTCTGCTACGCCTCACTGGTGGTCAACTTGAAGGCTGGCCTGGTTCACTTCCAGAACACGGAGACCAAACTCTTGGAGGAAAAAATGACCAAGATGGTTGTCGCAGTGGTGCTGGGCTTCGCCATTTGCTGGTTGCCGTTCTACGTTTTTAACTTCTATATGCTGTGGCATCCTGGGGATTTCACCCCAGCCATGGGGAAGGGTTTTGAATTTATTGTGCTCCTCTCCTATTCCTGGAGCTGTGCCAACCCCATCCTGTATGCCTGCCTCTCTGAAAAATACaggaaacattttcacattctgcTGTGTCCAAAGAAAAGATCTCAGAGCCTCCATTTTGATGCCAACACTGATGGCTATGACCTCAATGACTTAAGTGGATGGGAAATTATGAGTGTTGTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013194 True 1044 mRNA 0.51 1 24022377 24023420

Neighbor

gene id symbol gene type direction distance location
AMCG00013193 sstr5,LOC104918336,LOC102219310,LOC103393002,LOC102291375 coding downstream 18536 24002726 ~ 24003841 (-)
AMCG00013192 NA coding downstream 27121 23985127 ~ 23995256 (-)
AMCG00013189 LOC108438014,LOC105012792,LOC105899987,LOC107719992,LOC107654495 coding downstream 73689 23941711 ~ 23948688 (-)
AMCG00013191 LOC107721501,LOC107688114,LOC107590387,LOC107601276,LOC107654495 coding downstream 94799 23917200 ~ 23927578 (-)
AMCG00013190 NA coding downstream 110061 23902918 ~ 23912316 (-)
AMCG00013199 sox9,LOC106589342,LOC106579008,LOC106606426,LOC100135781 coding upstream 380918 24404338 ~ 24408807 (-)
AMCG00013201 NA coding upstream 698139 24721559 ~ 24778233 (-)
AMCG00013205 LOC105012035,LOC107756032,LOC102797349,LOC107745977,LOC101487969,LOC102294156,LOC107704417,LOC106591843,LOC104930253 coding upstream 777592 24801012 ~ 24830971 (-)
AMCG00013206 LOC105013038,LOC108437168,LOC103356210 coding upstream 822210 24845630 ~ 24862556 (-)
AMCG00013208 NA coding upstream 839755 24863175 ~ 24869166 (-)
G42760 NA non-coding downstream 105353 23912791 ~ 23917024 (-)
G42743 NA non-coding downstream 120457 23901443 ~ 23901920 (-)
G42704 NA non-coding downstream 243027 23778925 ~ 23779350 (-)
G42557 NA non-coding downstream 1206008 22816156 ~ 22816369 (-)
G42553 NA non-coding downstream 1316040 22706066 ~ 22706337 (-)
G42800 NA non-coding upstream 197231 24220651 ~ 24222738 (-)
G42993 NA non-coding upstream 1021958 25045378 ~ 25376323 (-)
G43011 NA non-coding upstream 1113356 25136776 ~ 25139743 (-)
G43040 NA non-coding upstream 1266050 25289470 ~ 25351738 (-)
G43042 NA non-coding upstream 1342846 25366266 ~ 25424074 (-)
G42749 NA other downstream 174900 23844083 ~ 23847477 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other downstream 183231 23826609 ~ 23839146 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other downstream 2495545 21503849 ~ 21526832 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other downstream 2572423 21448329 ~ 21449954 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other downstream 2600259 21411939 ~ 21422118 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 856221 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 1002318 25025738 ~ 25029004 (-)
G43001 NA other upstream 1051973 25075393 ~ 25078244 (-)
AMCG00013223 tk1,kith,LOC102792372 other upstream 1138737 25162157 ~ 25166773 (-)
G43070 NA other upstream 1492660 25516080 ~ 25516963 (-)

Expression


Co-expression Network