AMCG00013195


Basic Information

Item Value
gene id AMCG00013195
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 24022831 ~ 24116258 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013195
ATGAAAGCCAACCGCCACGTGTCCAGGGACCCAGGGGGTTCCAATGAGCAGAGGCTGCCACCTGCGGTGAAGTGGACAGCCATGGGGAGGACAGGCAGCAGGGAGAAGAACCACAGGAAGACGCTGATGATCTTGGCCCTTCTCGGGTTTCAGGATGGTGACGATAACCAGGGAGTTTCCAGCAAGTCCTACAACACACACCCCCAGGTAGAGGACGGCCATCAGCATGTCAAAGAGACAGGTCTGGGGCCCGTCGTCACTGTGAAGCAGGTCGTTGGAATAATTGAAGTGGCCAGTATGATTCCCGGCTATAGTCCAGTGATGCAAGCCCTGCTGGGAACACTCTTTACCTGGGGCCTCACAGCTGCAGGAGCTGCCCTGGTCTTTGTATTCTCCAGTGGGCAgaaGAGGATCCTGGATGGTAGCCTGGGGTTTGCTGCAGGGAGTAGGCAGGAGGTACGGCAGGTGGGGGGGCTGGGGTTTGGTGTGCTGAGTCGTGACTGCTCGGAGGAGAAGGGAATCGGAGAACCTGTTAAGGTGCCGTGCAATGCACATACCACTGCCACAGAAATTGCTGTGGGCTCAGTAACTGAGCACCTCTTCGGGATGGTGCGGGTTGTGATGCTGGCAGCCTCCTACTGGTCATTGCTCGCCCCAGCAATTGATATGGCAGAGGATTCTGGCAAGTATGGGTCCTTCGCGTTCGTCCCAGTTGCTGTAGGCTTCACCCTGGGAGCTGCCTTTGTGTACGGTGCTGATATCCTGATGCCTGCAATGttcCGCAAAGGCGTGGATGTCCTGAACCTTGGCGATGACACCCTAATGATTCTAGGCTACAAAGGATTAGAACAGACCTGA

Function

GO: NA

KEGG:

id description
ko00510 N-Glycan biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013195 True 858 mRNA 0.56 12 24022831 24116258

Neighbor

gene id symbol gene type direction distance location
AMCG00013187 NA coding upstream 38406 23973082 ~ 23984425 (+)
AMCG00013188 NA coding upstream 60874 23952046 ~ 23961957 (+)
AMCG00013186 NA coding upstream 121224 23887584 ~ 23901607 (+)
AMCG00013181 wipi1,LOC107719990,LOC107590389,LOC107688112,LOC107721503 coding upstream 158635 23849175 ~ 23864196 (+)
AMCG00013180 NA coding upstream 175401 23840594 ~ 23847430 (+)
AMCG00013197 NA coding downstream 8648 24124906 ~ 24192482 (+)
AMCG00013196 slc39a11,LOC107693650 coding downstream 100252 24216510 ~ 24220719 (+)
AMCG00013200 NA coding downstream 658540 24774798 ~ 24777606 (+)
AMCG00013203 NA coding downstream 672367 24788625 ~ 24793416 (+)
AMCG00013202 NA coding downstream 682069 24798327 ~ 24799733 (+)
G42780 NA non-coding upstream 14981 24007353 ~ 24007850 (+)
G42779 sstr5,LOC104918336,LOC102219310,LOC102291375 non-coding upstream 18944 23997794 ~ 24003887 (+)
G42705 NA non-coding upstream 191431 23784408 ~ 23831400 (+)
G42619 NA non-coding upstream 462171 23554672 ~ 23560660 (+)
G42554 NA non-coding upstream 1159849 22861815 ~ 22862982 (+)
G42816 NA non-coding downstream 294584 24410842 ~ 24411044 (+)
G42845 NA non-coding downstream 629265 24745523 ~ 24745754 (+)
G42847 rnf213,LOC107701915,LOC107556605 non-coding downstream 633434 24749692 ~ 24750256 (+)
G42848 NA non-coding downstream 634050 24750308 ~ 24750565 (+)
G42849 NA non-coding downstream 634549 24750807 ~ 24751467 (+)
AMCG00013147 NA other upstream 1762015 22248497 ~ 22260816 (+)
G42453 NA other upstream 1777041 22242429 ~ 22245790 (+)
G42344 LOC108412647 other upstream 2536023 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 2551271 21286031 ~ 21471560 (+)
AMCG00013198 NA other downstream 125011 24241269 ~ 24331854 (+)
G42846 NA other downstream 631234 24747492 ~ 24749395 (+)
G42858 NA other downstream 652166 24768424 ~ 24770148 (+)
AMCG00013236 NA other downstream 1397095 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 1677147 25793405 ~ 25798013 (+)

Expression


Co-expression Network