AMCG00013205 (LOC105012035,LOC107756032,LOC102797349,LOC107745977,LOC101487969,LOC102294156,LOC107704417,LOC106591843,LOC104930253)


Basic Information

Item Value
gene id AMCG00013205
gene name LOC105012035,LOC107756032,LOC102797349,LOC107745977,LOC101487969,LOC102294156,LOC107704417,LOC106591843,LOC104930253
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 24801012 ~ 24830971 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013205
ATGAATTTGCCTGCAGTACTGGATAACCTATTGACCTCAATGAAGTTCGTTCTGCACGGAATGGGTGTCCTTAGGATCAATCTGGCcagcaacaaaaacaagGTCCACGCTCACTCTGTGCTGTCTTGTGGCCGCTGTTTCGATGAAGACCAGGTGCTGTTCCCCTTTATAGCTCATGCCTTGCGCTGTCTGTGGGCCGACCAGGGTAACATGGCCCGGATCATCGCCCCAGAGTACATGCCCACCGAGACTGATGTTCTGAGAGTCAGGCTGCGGACTACTGGTGTCATCGAGACCCAGTTCAAAGTCAGCCACCTGGTTTTCAGGATGTATGACGTGGGGGGgcagaggacagagaggaggaAGTGGATCAGCTGTTTTGAAGACGTCAGGGCTGTGTTGTTTGTGGTCTCTCTCAGCGGGTACGACATGACCCTGGTGGAAGACCCGTCCACGAATCGTCTACAAGAGAGCCTGAAACTCTTTTCATCAATCTGCAATAATGTATTCTTCAGAAGTACCTCCATGattTTGTTCCTCAACAAAATTGACCTTTTTCAAGAGAAGATTTTACATTCAAGCAGACATTTGAGACTGTATCTCCCACAGTACAGAGGTCCCGACTTTGACGTAGACTCTGCAGCTCGATACATCGCCGGCATGTTCCTCTCACTCAATAAGACTCCCAGCAAGCTCATCTATCACCATTTCACCACGGCCACAGACACCTCCAACGTGCAAATTGTCTTCCAGGTGGTTATGGACACAATCATCAAGGAAAACCTGGAAGCAGTGTCGTTGCTCTGAGAAGAAACCCGATGGTGCTCTTTGACCAGCAATCGAGAAGAGAGTGTTGCCATTGTATGATGGATTATGCTACTGTATTATTGCCTGAAGCCACTTTTAAATTCTATGTTTAATATATCTTCCAAAGGACTGGCCGGGACTTAAAGGCTACCTGTCTTTTTAAAACGACtcacaccatttaaaaaacataatgcaaaaaaatgcaatttgtgtacatttgtatatttattttgtaatctcCAGAAATAATTCCAAGTATTcatacaagaacaacaaaaatcagCTGcagtaaatgctttttttttttaattttttttttttttttaaagcttatttgttccattttgtgaaatgcatCTACTTGTTACTACAACCACAAGTCAGTTTCTAAAGTAATTAGTCAAACTGCTTGGATACTAACACCTAAAGGTAAAATCCAAACCTAGCCTCAACTGATGTTGCAGCCCTCTTCAGAGAGATATTTGAGAGAACCAAATCTCTTCACTGCTGGTAATATCTTTACACTTCAGATAAGTGAcactgctttgcttttttctgttttcataaaatacaatCCATCACGAAAAGTATTGGGACTACAGAGAACTACCAAAAGATAGGATGCGAGTCCACCCTTGACTTTAATTACTGCCACAGTccttttttgtaaattgttctATGGTACGGGCAGATTAGTCTTGATTGTTAAGTTCCACACTGTTTCTACAGCTTCATAATCATTTGTGGGAGGGTTATTATGCAAGAGATCAATGCATTTTGGAATTAAATACTAAACTagaataaaagtattatttggAGTTCAATTATATTGCTCCATGATGCTATATTAGCAAGTGACTAATAGCTGTAACTTTTTCTGTTGTATGGATTGAGCAGGATGTATTTCTTGGCTCACTATGCAAAGACAAAAGCTTTACCAACGCTTGTGGACATGCTATTTCTGCCTTCAGTCAATCGATCAAGTGTTGTCTGACACAGGTATAATTGGAACCAGATCATGGTGAGAAAAATACCCTTATTTCCTATTATAAATCCATGAATCCTGTCATTCTTCACAAGCAATTCAAACCTTGGTTTACTCTGTTGTAGGGATATACTGCttttactttaatgtttttatttgtttctttactttttgAGCTATGCTGATGTTAGAAGCAGTacttacaaaattaattttaacattatatttgaGGTTTGccaccttttttttgtattagatTATACTGTTATCCAGTAGGTATGTACTATATGTTAAACTGGATTGTTCTGGCTGATATCAAGTCATGATGGAAGTCTGTGAATTGAGTGCATGAACTCCCCCTTTCTTTTGTTTGGCAGCTGCGACTCCACACCTGCTCATTAACAACCAAAAATAACACttgtaattgattttctttatttgattaaCACATACAGGTCCATACCTTCACTGTAAATGTAGCTGTTTTTTTACGCTAACTTGTCTACAGTGTAGCAGTATGAATCTACTGAATAGGTGCCTTCAGTTCAGAAAAACAAGCATGAAAAATTATCAACGTTTGGTTTTCATTTGCAGGTGGAGAAGGATGAATTGACAAGCTGTGCTGGTCTATTTTCCTTCTCCATTGTTTCTAAAGTTTGAATTTAAAAGTTAACATTGAGTCAGTGAGAGATTCTAAAATGGTTCCCTAAACTGGAGTAAGAAAAGGAAACCTCTCCAAAAACTCCGTGCCTTAAGGTGTAAGAAGATCTACCTGTgccttttttgtattatcacAAGTATGctatttttgtccatgccattttaatatatgtatatacatatttttaattaatttaataaatgtttgtattacttTGATGCAAATTCAGTGTAtcaagttttatttgtgtaaattcATCCACTGTGAAtgggaga

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(o) subunit alpha

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function
GO:0001664 G protein-coupled receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013205 True 2728 mRNA 0.38 8 24801012 24830971

Neighbor

gene id symbol gene type direction distance location
AMCG00013201 NA coding downstream 22779 24721559 ~ 24778233 (-)
AMCG00013199 sox9,LOC106589342,LOC106579008,LOC106606426,LOC100135781 coding downstream 392205 24404338 ~ 24408807 (-)
AMCG00013194 NA coding downstream 777592 24022377 ~ 24023420 (-)
AMCG00013193 sstr5,LOC104918336,LOC102219310,LOC103393002,LOC102291375 coding downstream 797171 24002726 ~ 24003841 (-)
AMCG00013192 NA coding downstream 805756 23985127 ~ 23995256 (-)
AMCG00013206 LOC105013038,LOC108437168,LOC103356210 coding upstream 14659 24845630 ~ 24862556 (-)
AMCG00013208 NA coding upstream 32204 24863175 ~ 24869166 (-)
AMCG00013207 NA coding upstream 38326 24869297 ~ 24876994 (-)
AMCG00013210 pycr1,LOC108236293,LOC103150509,LOC107572052,LOC103465458 coding upstream 76150 24907121 ~ 24912555 (-)
AMCG00013212 NA coding upstream 89330 24920301 ~ 24921206 (-)
G42800 NA non-coding downstream 578274 24220651 ~ 24222738 (-)
G42760 NA non-coding downstream 883988 23912791 ~ 23917024 (-)
G42743 NA non-coding downstream 899092 23901443 ~ 23901920 (-)
G42704 NA non-coding downstream 1021662 23778925 ~ 23779350 (-)
G42557 NA non-coding downstream 1984643 22816156 ~ 22816369 (-)
G42993 NA non-coding upstream 214407 25045378 ~ 25376323 (-)
G43011 NA non-coding upstream 305805 25136776 ~ 25139743 (-)
G43040 NA non-coding upstream 458499 25289470 ~ 25351738 (-)
G43042 NA non-coding upstream 535295 25366266 ~ 25424074 (-)
G43044 NA non-coding upstream 536627 25367598 ~ 25369063 (-)
G42749 NA other downstream 953535 23844083 ~ 23847477 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other downstream 961866 23826609 ~ 23839146 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other downstream 3274180 21503849 ~ 21526832 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other downstream 3351058 21448329 ~ 21449954 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other downstream 3378894 21411939 ~ 21422118 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 48670 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 194767 25025738 ~ 25029004 (-)
G43001 NA other upstream 244422 25075393 ~ 25078244 (-)
AMCG00013223 tk1,kith,LOC102792372 other upstream 331186 25162157 ~ 25166773 (-)
G43070 NA other upstream 685109 25516080 ~ 25516963 (-)

Expression


Co-expression Network