AMCG00013208


Basic Information

Item Value
gene id AMCG00013208
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 24863175 ~ 24869166 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013208
GCACTAGAGGGCGCTGTTGTGGGAAGGCTATGTTCATGCACCCGGTCATGTCTTGTCTGCGCTTGTTGGTTTAAATGCCCGTCCTGGTTGTTTGGATACATCAGCACAACAGGAAGAATGGAGCCGGCGCAGCGGCCCGGTGTGTCCGCTCGGACGGAGAGGAAAGCGCAAGAGAGGGCGAAGATACTGCAGCAGGAGAACAAGAGGAACACGCTGAAGCTCGTGTCCAGGATCTTGAAAAAATCTGAGTGTGAGCGGACGGAAGAGGAGCTGTCTGTGCTACAGAGGTATGAAGAGACCGTACAGGAGCTCACACTGCGTCAAATCAGGAGGGACAACCTGAAGAGAAAGCAAGAAGAGGTTGTCGACAGTCCAGATGAGCTGCTGAAGAAAGTGAAAGAGCTGTCGGCCGCTGTTCGAGAAGCCAACTACCTGGTGGTGTACACTGGAGCTGGGATTAGCACGGCAGCTTCCATCCCAGACTACAGAGGCCCGAATGGAGTGTGGACACTGCTGCAGAAAGGCAGACCAGTAAGtgcTTCAGACCTCAGTGAAGCTGAACCCACGCTCACTCACATGTGCATTAGGAAACTGTATGAAGAGAAACTGgtGCAGCATGTGGTGTCTCAGAACTGTGACGGGCTCCATCTGCGCAGCGGTCTGCCTCGAGAGGCGCTCTCTGAGCTACACGGGAACATGTTCATTGAGGTGTGCACCGCCTGTTCCCCCCCCAGGGAGTTTATCCGGCTGTTTGACGTGACGGAGCGCACCTCTCTGCACAGACACGGCACAGGACGCAGCTGCCCCCACTGCGGCGCCGAGCTCAGGGACACCATCGTCCACTTTGGGGAGCGCGGTACACTGGAACAACCACTCAACTGGAAAGGGGCGGCTGAGGCGGCTGGGAAGGCAGACCTCATCCTCTGCCTGGGCTCCAGCTTGAAGGTCCTTAAGAAATATGCCTGTCTGTGGTGTATGAACAGAGCTCCCAACAAAAGACCTAAGCTCATTATTGTAAATTTACAgtggacACCAAAAGATGACCTTGCTGCCCTCAAAATCCATGGGAAATGTGATGATGTCATTGGTCTTTTGATGAAGGAACTGGACCTCCAAACTCAAGAATATGACAAATTGGAGGACCCTATTTTCAGCCTCGCCACTGCCCTGAGGCCAGAGGAGGAGGATAGTCACAGTCGTAAACTGATAGTGCCTCCTGCTGGCCAGGAGGATTGCTCACAGGGGTCCACAGTGGAGCCTGGGGGGATGTCTGTCCAGGGAGGCTGGTATGGCCGTGGCTGTGCCAAGggcaggaagaagaagaagccaTCAACTTGAAAAGTACAGGATGAAACCGCAGAAACGTATTCACAAGTTTTGCAGATGGTAATTGTTGAAATCTGTAATGGGAGAACTTCAATTTTTCCCCTTTCACAAAGTCTACAACTGACAGAGTCTCCAAACCACCCAGTGGCACAGATAGAAGATTTTGGATTCTATTTGTGCAATTTTGAATATGCACCTTACTTTGTCCTCAGGAATTTTTGTCGCAGTTAAATACTTTTAAGTTGAGAGGCACAACTGTTGTACTGACAACAGGGCATTGGACACAAGCCTTGGAATAATCCTTTTATTTGAATCTTGATCTGTTTCTAAAATGAGAAACGTATCTTTCGTATTACGAAGTTCTCATTGTGTTAGTACCTGTGCATGTTTACATAtaaacttaaatttaaaaatgggtACTAATGAGAAACAAATTAAGTTCTTTAATTTAAGGGGGTTGAGTTGCAACATGCTCTGTTGCTTAACACATGGGTTCAGCCACAAGTTGTTGTTTGATGTCGAAATTGAGAAAGTTAAAAGAGCCCTTAGattaacaactttttttttcaattaatatttaaattaccaCTGCCactgtttacaaaacaatacCTTCTGAAGCATTGAAGGCAACTCAGGGGCAAAGTTCTTACAAATGGGCATTTTTGTGCACTTGTGATGCTATAGCCATGATACATACAAACCTTCCTTCTTACTGATGACAGTTCAACTTTGCAGCTGTGTTTTACTTATGTGTATTCAGTTTGGGGtttttgtatacttttttttctctcccccatgtattaatatattggTATTTTGACACTTGTCTCAGGACTTGTGACTGCAATAGTATTTTTGAGAGTGCCACAATGTCTTATAACCTTTCTTTACTGGTTCCTTTATCTGGACTATTCAAAGCTGTTTACAATACAACTTACAGTGCTTCAGCAGTTCAGAAATGCTTTTTAGTGTTCAGCAAAActtcattatattatttcttgAACTACTGCTTGGACTGGAtgtaataaaattacattttacaatttttttctgtcactgtctttgtttgcatttcttaaaaagTCATAAAAAG

Function

GO: NA

KEGG:

id description
K11417 SIRT7, SIR2L7; NAD+-dependent protein deacetylase sirtuin 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013208 True 2422 mRNA 0.46 10 24863175 24869166

Neighbor

gene id symbol gene type direction distance location
AMCG00013206 LOC105013038,LOC108437168,LOC103356210 coding downstream 619 24845630 ~ 24862556 (-)
AMCG00013205 LOC105012035,LOC107756032,LOC102797349,LOC107745977,LOC101487969,LOC102294156,LOC107704417,LOC106591843,LOC104930253 coding downstream 32204 24801012 ~ 24830971 (-)
AMCG00013201 NA coding downstream 84942 24721559 ~ 24778233 (-)
AMCG00013199 sox9,LOC106589342,LOC106579008,LOC106606426,LOC100135781 coding downstream 454368 24404338 ~ 24408807 (-)
AMCG00013194 NA coding downstream 839755 24022377 ~ 24023420 (-)
AMCG00013207 NA coding upstream 131 24869297 ~ 24876994 (-)
AMCG00013210 pycr1,LOC108236293,LOC103150509,LOC107572052,LOC103465458 coding upstream 37955 24907121 ~ 24912555 (-)
AMCG00013212 NA coding upstream 51135 24920301 ~ 24921206 (-)
AMCG00013211 notum1a,notum,LOC107732149 coding upstream 57971 24927137 ~ 24943446 (-)
AMCG00013217 NA coding upstream 161425 25030591 ~ 25031773 (-)
G42800 NA non-coding downstream 640437 24220651 ~ 24222738 (-)
G42760 NA non-coding downstream 946151 23912791 ~ 23917024 (-)
G42743 NA non-coding downstream 961255 23901443 ~ 23901920 (-)
G42704 NA non-coding downstream 1083825 23778925 ~ 23779350 (-)
G42557 NA non-coding downstream 2046806 22816156 ~ 22816369 (-)
G42993 NA non-coding upstream 176212 25045378 ~ 25376323 (-)
G43011 NA non-coding upstream 267610 25136776 ~ 25139743 (-)
G43040 NA non-coding upstream 420304 25289470 ~ 25351738 (-)
G43042 NA non-coding upstream 497100 25366266 ~ 25424074 (-)
G43044 NA non-coding upstream 498432 25367598 ~ 25369063 (-)
G42749 NA other downstream 1015698 23844083 ~ 23847477 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other downstream 1024029 23826609 ~ 23839146 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other downstream 3336343 21503849 ~ 21526832 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other downstream 3413221 21448329 ~ 21449954 (-)
AMCG00013137 myhm86-1,LOC107373462,LOC107574740,LOC103143810,LOC108243721,LOC106527115,LOC101079795,LOC108261476,LOC101068441,LOC101071797,LOC101163414 other downstream 3441057 21411939 ~ 21422118 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 10475 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 156572 25025738 ~ 25029004 (-)
G43001 NA other upstream 206227 25075393 ~ 25078244 (-)
AMCG00013223 tk1,kith,LOC102792372 other upstream 292991 25162157 ~ 25166773 (-)
G43070 NA other upstream 646914 25516080 ~ 25516963 (-)

Expression


Co-expression Network