AMCG00013212


Basic Information

Item Value
gene id AMCG00013212
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 24920301 ~ 24921206 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013212
ATGGATGCCCAGGGAGGACCCTACCTAAACGTGGCGGCAGTGGCTTCCCCAGTAGGCGTTGCACGACTGGGGCAGATGATTCTGGGTTGCACCACGCTGAGTCTAGTGACCCACCAAGCGGGGTACAGCGCAGCCTACGGGACCTTCTGCATGTTTGTGTGGTGCTTCTGCTTTGCGGTGACCGTGCTGGTCTTCATGCTGGACTTCACCCGGCTGCACAGCTGCCTGCGCATCTCCTGGGACAACTTCACCATCGCCTTTGCCATGCTGGCCACGCTCATGTACGTCACGGCCTCTGTAGTCTACCCCCTGTACTTCCTGCGCTCCGAGTGCCCGTACAACGGCTGTGAGGTGCGCAACTACCGCATCGTTGTCACCGTCTGCTCCTGCCTCTGCACCCTGGCCTACGGCGCAGAGGTCTTTTTCACGAGGGCCAAGCCGGGTCATGTGGTGGGCTACATGGCCACGGTCTCAGGACTGCTGAAGATCGTCCAGGCCTTCGTGGCCTGCATCATCTTCGGTGCCCTGGTCAATGACAGCCAGTACAGCCGCCACATCGCCACCCAGTACTGCGTGGCAGTCTACAGCTTCTGCTTCACCCTCACAGTGATCGTGGTGATACTCACCGTCTCCGGCAAGACCTCAGCGCTGCGATGCCCCTTCGATCGTTTCGTGGTCATCTACACCTTCCTGGCTGTCTTGCTGTACCTGAGTGCCGCCATCATCTGGCCCATCTTCTGCTTTGACAAGAAGTACGGCAACCCCAGCAGGCCTTCCAGCTGCCCACAGGGAAAGTGCCCCTGGGACAGCCAGTTGGTGGTGGCCATCTTCACCTACATCAACATGGTGCTGTACATCATTGACCTGGTCTATTCTCAGAGGATCCGCTTTGTAGCTCAGACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013212 True 906 mRNA 0.59 1 24920301 24921206

Neighbor

gene id symbol gene type direction distance location
AMCG00013210 pycr1,LOC108236293,LOC103150509,LOC107572052,LOC103465458 coding downstream 7746 24907121 ~ 24912555 (-)
AMCG00013207 NA coding downstream 43307 24869297 ~ 24876994 (-)
AMCG00013208 NA coding downstream 51135 24863175 ~ 24869166 (-)
AMCG00013206 LOC105013038,LOC108437168,LOC103356210 coding downstream 57745 24845630 ~ 24862556 (-)
AMCG00013205 LOC105012035,LOC107756032,LOC102797349,LOC107745977,LOC101487969,LOC102294156,LOC107704417,LOC106591843,LOC104930253 coding downstream 89330 24801012 ~ 24830971 (-)
AMCG00013211 notum1a,notum,LOC107732149 coding upstream 5931 24927137 ~ 24943446 (-)
AMCG00013217 NA coding upstream 109385 25030591 ~ 25031773 (-)
AMCG00013224 NA coding upstream 178145 25099351 ~ 25111435 (-)
AMCG00013235 NA coding upstream 436474 25357680 ~ 25358501 (-)
AMCG00013233 NA coding upstream 464533 25385739 ~ 25418578 (-)
G42800 NA non-coding downstream 697563 24220651 ~ 24222738 (-)
G42760 NA non-coding downstream 1003277 23912791 ~ 23917024 (-)
G42743 NA non-coding downstream 1018381 23901443 ~ 23901920 (-)
G42704 NA non-coding downstream 1140951 23778925 ~ 23779350 (-)
G42557 NA non-coding downstream 2103932 22816156 ~ 22816369 (-)
G42993 NA non-coding upstream 124172 25045378 ~ 25376323 (-)
G43011 NA non-coding upstream 215570 25136776 ~ 25139743 (-)
G43040 NA non-coding upstream 368264 25289470 ~ 25351738 (-)
G43042 NA non-coding upstream 445060 25366266 ~ 25424074 (-)
G43044 NA non-coding upstream 446392 25367598 ~ 25369063 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other downstream 17873 24879641 ~ 24902428 (-)
G42749 NA other downstream 1072824 23844083 ~ 23847477 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other downstream 1081155 23826609 ~ 23839146 (-)
AMCG00013133 wu:fd14a01,LOC101068441,LOC101079795,LOC103368359,LOC107721187 other downstream 3393469 21503849 ~ 21526832 (-)
AMCG00013131 LOC101068441,LOC106598369,LOC106594844,LOC106593081,LOC106593408,LOC104955241 other downstream 3470347 21448329 ~ 21449954 (-)
AMCG00013216 NA other upstream 104532 25025738 ~ 25029004 (-)
G43001 NA other upstream 154187 25075393 ~ 25078244 (-)
AMCG00013223 tk1,kith,LOC102792372 other upstream 240951 25162157 ~ 25166773 (-)
G43070 NA other upstream 594874 25516080 ~ 25516963 (-)
AMCG00013241 NA other upstream 667281 25588487 ~ 25628252 (-)

Expression


Co-expression Network