AMCG00013215


Basic Information

Item Value
gene id AMCG00013215
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 24973717 ~ 24991262 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013215
ATGACACTGAAGTCTCTTGGTCTCAGTAGTGGCAGTGCCATTGTCAGATATGTGCTGAAGAAGTCAAAGTCCCCTGAGCAAGGTGAACCCATGGAAGTAGGGGGGGCTGCATCAGCTCCTGCTGCCATGGAGATCAAGGGGACAAAAGAGGAGCTGAAGGTGGTGCATCAGCCCCTGCCAGCTGAGTTAACGCCTGAGTGTGCGGCTCTTGATAAGACGGAGCCAGAAGCTCCCTCGGAGCAGCCGGTTGTTGTGCCCACCCCGTTACAAAGCAGTACCTCAGAgatcagcaaaataaaaagtgaagcaGACCTGAATCTAGATCCTCAACCAGAATCTGTAGAACCTGTGCCAGTTAAAGATCAAACTGTCAAAACCCAAGAATCCAATTGGGAGCCTCCTCCAGAACGGCCCGGACCTTCCACTGAGAGGCCCTCGGAGATGAAGCCAGGCTCAGCCCCACCTCCAAAACCAAGCAACTTCGTGCCCTTCTCTGGAGGTGGGCAGCGGCTGGGGGGCCCGGGAGCCGACAGTGTTCAGACAGGAAGTAGACTACCTAGCACCAGTTCACAGACATCCCTCTCTAGCCACGGAGGACCGCCACAGGCCAAGAAACCCAAGCCCAGCAGCAGCGAGATAAAGCCGGTGGACAGAGAGCCCCTTGTGTATCATATAGATGCTGGAGAGCGTCGCCACAGCGACACCGAAGACCTTCCAGATGAGTTCTTTGAGGTGACCGTCGATGACATCAGGAGGCGGTTTGCACAGCTCAAGAGCGAAcgGAAGCTGTTTGAAGAAGCTCCACTGATGACAAAGGCCCTGCGGGAGTCTCAGATGAAGGAGAAGTTGGAGAGATACCCCAAGGTGGTCGTGCGAGTTCAGTTTCCAGACAGACACATCTTACAGGGATTCTTCCGGCCTTTAGAGACAGTTAAGTCAGGAGGACCACCAGGGCCCCAGCTTATGAGCCAGGAGTGCTTGGCAGGGCTCATCGTGGTGGTCCTGGGA

Function

GO: NA

KEGG:

id description
K15627 ASPSCR1, ASPL; tether containing UBX domain for GLUT4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013215 True 1008 mRNA 0.55 7 24973717 24991262

Neighbor

gene id symbol gene type direction distance location
AMCG00013209 NA coding upstream 16134 24954971 ~ 24957583 (+)
AMCG00013202 NA coding upstream 173984 24798327 ~ 24799733 (+)
AMCG00013203 NA coding upstream 180301 24788625 ~ 24793416 (+)
AMCG00013200 NA coding upstream 196111 24774798 ~ 24777606 (+)
AMCG00013196 slc39a11,LOC107693650 coding upstream 752998 24216510 ~ 24220719 (+)
AMCG00013214 NA coding downstream 54120 25045382 ~ 25053636 (+)
AMCG00013213 NA coding downstream 88414 25079676 ~ 25081286 (+)
AMCG00013219 NA coding downstream 130314 25121576 ~ 25133716 (+)
AMCG00013222 NA coding downstream 144607 25135869 ~ 25139723 (+)
AMCG00013220 NA coding downstream 150707 25141969 ~ 25150662 (+)
G42922 NA non-coding upstream 46972 24924791 ~ 24926745 (+)
G42906 NA non-coding upstream 91659 24879764 ~ 24882058 (+)
G42857 NA non-coding upstream 205477 24768015 ~ 24768240 (+)
G42856 NA non-coding upstream 205936 24767518 ~ 24767781 (+)
G42855 NA non-coding upstream 206259 24767256 ~ 24767458 (+)
G42925 NA non-coding downstream 193 24991455 ~ 25016366 (+)
G42950 NA non-coding downstream 97908 25089170 ~ 25376099 (+)
G43062 NA non-coding downstream 516929 25508191 ~ 25511347 (+)
G43063 NA non-coding downstream 520946 25512208 ~ 25512901 (+)
G43064 NA non-coding downstream 531216 25522478 ~ 25524992 (+)
G42858 NA other upstream 203569 24768424 ~ 24770148 (+)
G42846 NA other upstream 224322 24747492 ~ 24749395 (+)
AMCG00013198 NA other upstream 641863 24241269 ~ 24331854 (+)
AMCG00013147 NA other upstream 2712901 22248497 ~ 22260816 (+)
G42453 NA other upstream 2727927 22242429 ~ 22245790 (+)
AMCG00013236 NA other downstream 522091 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 802143 25793405 ~ 25798013 (+)
AMCG00013251 NA other downstream 1161974 26153236 ~ 26161139 (+)
AMCG00013255 NA other downstream 1263712 26254974 ~ 26258982 (+)
AMCG00013257 LOC106612075,LOC107560953 other downstream 1376533 26367795 ~ 26396705 (+)

Expression


Co-expression Network