AMCG00013229


Basic Information

Item Value
gene id AMCG00013229
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 25375516 ~ 25384472 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013229
GCTGTAGGATGCGCAGCGCGACCCCAGACTCCTGACTCAAGACCAGACCAGACTCCTGAATCAAGATGTAGTGACTAGTGTAGTGCAAGACCAGGAAACTGGAAACGAAAGCACAGAAAGCAgTCCAACATGGAGTGGAACAGCTATGGCTGAAATAAAGGATTGCGTTGAGGACTTTTGCAATCTTACAATCTCCAGCGAATACCTGGAGGAACTCCACAGATTGGTGGAGAAGCACAGAAATAAGACAGTACGTTTAGGTGGCCCATACGAGTACGATCTGACAATTGGTGGACTTGAAGACACAGCGTGGAGTGAGAAGGAATTGAAACTTGAGGACATAGAGGAACTATACCTCCCTGAGAGCGAGAAGATGGTTGTTTTGGGATATATTGATGACTTCGTCATCTTCGAGGATGAAGTACAGTTGGTCGTTACTGCTGATGTCAAGGGGAATGTCTACGCCAATGATGCCGACGAATTATATCATGTGACAACCAGTGTGAAGGACTTCTTCATAACAGGAGTGCCGAAAAGTCCAATCACACGCTACTATAAGGAAGAAATCATTAAGTCAAAGATAAGTGTGAAAACATTTGGATTTGCAGATTTGGAGAAGGTAGAAATGCAAGGGGTGAGGGGAAGTGCCCTGGGCACCTTGGTGTGCTGTATCTATGAGGAGTCTCTGGAGCTCATCCATCTGGAGCTAGTTTTGGGAGCTGGCCAGCTGAAATGGGCCCAGGAGCTCAGAAGACAGGATCCAGAGCCCTATGAGGAGCTTGAGGACAATTCATCATCCGGCAATGCTGCCTACAGAGAGCCCTTACACCCCAACATGGAGATCAGGTTTCTGATCATCACCTCTGAGAAGCTCTTCCACACTGTGGGGAGTTGGAGGCAGCAGGAGGGGCCAGGGTGTCGCgtgaaAGGAATGCTGGACGATATTCGAGAGAGCCTgccagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013229 True 964 mRNA 0.49 7 25375516 25384472

Neighbor

gene id symbol gene type direction distance location
AMCG00013231 NA coding upstream 8970 25357317 ~ 25366546 (+)
AMCG00013228 LOC108274176,LOC108426518,LOC103022618 coding upstream 23778 25331132 ~ 25351738 (+)
AMCG00013230 NA coding upstream 51076 25319106 ~ 25324440 (+)
AMCG00013225 usp36,LOC107717487,LOC104948677 coding upstream 120315 25231148 ~ 25255201 (+)
AMCG00013226 timp2,timp2a,LOC106612362,LOC107684079,LOC107755484 coding upstream 145500 25207547 ~ 25230016 (+)
AMCG00013234 socs3 coding downstream 37189 25421661 ~ 25423984 (+)
AMCG00013232 NA coding downstream 95386 25479858 ~ 25485620 (+)
AMCG00013237 NA coding downstream 167123 25551595 ~ 25554794 (+)
AMCG00013243 slc38a10,LOC107749860 coding downstream 362193 25746665 ~ 25775438 (+)
AMCG00013244 LOC105892758 coding downstream 393440 25777912 ~ 25784972 (+)
G42925 NA non-coding upstream 359150 24991455 ~ 25016366 (+)
G42922 NA non-coding upstream 448771 24924791 ~ 24926745 (+)
G42906 NA non-coding upstream 493458 24879764 ~ 24882058 (+)
G42857 NA non-coding upstream 607276 24768015 ~ 24768240 (+)
G42856 NA non-coding upstream 607735 24767518 ~ 24767781 (+)
G43062 NA non-coding downstream 123719 25508191 ~ 25511347 (+)
G43063 NA non-coding downstream 127736 25512208 ~ 25512901 (+)
G43064 NA non-coding downstream 138006 25522478 ~ 25524992 (+)
G43078 NA non-coding downstream 204007 25588479 ~ 25592334 (+)
G43079 bahcc1,LOC107722173 non-coding downstream 209899 25594371 ~ 25594607 (+)
G42858 NA other upstream 605368 24768424 ~ 24770148 (+)
G42846 NA other upstream 626121 24747492 ~ 24749395 (+)
AMCG00013198 NA other upstream 1043662 24241269 ~ 24331854 (+)
AMCG00013147 NA other upstream 3114700 22248497 ~ 22260816 (+)
G42453 NA other upstream 3129726 22242429 ~ 22245790 (+)
AMCG00013236 NA other downstream 128881 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 408933 25793405 ~ 25798013 (+)
AMCG00013251 NA other downstream 768764 26153236 ~ 26161139 (+)
AMCG00013255 NA other downstream 870502 26254974 ~ 26258982 (+)
AMCG00013257 LOC106612075,LOC107560953 other downstream 983323 26367795 ~ 26396705 (+)

Expression


Co-expression Network