Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013237 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 25551595 ~ 25554794 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0000166 | nucleotide binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013237 | True | 836 | mRNA | 0.55 | 5 | 25551595 | 25554794 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013232 | NA | coding | upstream | 65975 | 25479858 ~ 25485620 (+) |
| AMCG00013234 | socs3 | coding | upstream | 127611 | 25421661 ~ 25423984 (+) |
| AMCG00013229 | NA | coding | upstream | 167123 | 25375516 ~ 25384472 (+) |
| AMCG00013231 | NA | coding | upstream | 185049 | 25357317 ~ 25366546 (+) |
| AMCG00013228 | LOC108274176,LOC108426518,LOC103022618 | coding | upstream | 199857 | 25331132 ~ 25351738 (+) |
| AMCG00013243 | slc38a10,LOC107749860 | coding | downstream | 191871 | 25746665 ~ 25775438 (+) |
| AMCG00013244 | LOC105892758 | coding | downstream | 223118 | 25777912 ~ 25784972 (+) |
| AMCG00013252 | ttyh2,LOC106589617,LOC106610147 | coding | downstream | 705246 | 26260040 ~ 26312137 (+) |
| AMCG00013254 | dnai2,LOC106610195 | coding | downstream | 759492 | 26314286 ~ 26318743 (+) |
| AMCG00013253 | kif19,LOC107560952 | coding | downstream | 766972 | 26321766 ~ 26363091 (+) |
| G43064 | NA | non-coding | upstream | 26603 | 25522478 ~ 25524992 (+) |
| G43063 | NA | non-coding | upstream | 38694 | 25512208 ~ 25512901 (+) |
| G43062 | NA | non-coding | upstream | 40248 | 25508191 ~ 25511347 (+) |
| G42950 | NA | non-coding | upstream | 175496 | 25089170 ~ 25376099 (+) |
| G42925 | NA | non-coding | upstream | 535229 | 24991455 ~ 25016366 (+) |
| G43078 | NA | non-coding | downstream | 33685 | 25588479 ~ 25592334 (+) |
| G43079 | bahcc1,LOC107722173 | non-coding | downstream | 39577 | 25594371 ~ 25594607 (+) |
| G43080 | NA | non-coding | downstream | 39903 | 25594697 ~ 25595941 (+) |
| G43081 | NA | non-coding | downstream | 46019 | 25600813 ~ 25601177 (+) |
| G43082 | NA | non-coding | downstream | 49204 | 25603998 ~ 25604238 (+) |
| AMCG00013236 | NA | other | upstream | 29914 | 25513353 ~ 25521681 (+) |
| G42858 | NA | other | upstream | 781447 | 24768424 ~ 24770148 (+) |
| G42846 | NA | other | upstream | 802200 | 24747492 ~ 24749395 (+) |
| AMCG00013198 | NA | other | upstream | 1219741 | 24241269 ~ 24331854 (+) |
| AMCG00013147 | NA | other | upstream | 3290779 | 22248497 ~ 22260816 (+) |
| AMCG00013248 | NA | other | downstream | 238611 | 25793405 ~ 25798013 (+) |
| AMCG00013251 | NA | other | downstream | 598442 | 26153236 ~ 26161139 (+) |
| AMCG00013255 | NA | other | downstream | 700180 | 26254974 ~ 26258982 (+) |
| AMCG00013257 | LOC106612075,LOC107560953 | other | downstream | 813001 | 26367795 ~ 26396705 (+) |
| AMCG00013265 | LOC107672452,LOC107711237,LOC107567237,LOC107670476 | other | downstream | 873152 | 26427946 ~ 26478544 (+) |
